Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2574 ATGGAGGAGCTTGCCAATGTAAATTCTGAACTAAGTCCAAGAAGTCGTAGAATGCTCATGCTGGATGCTGATTCTGTTGTAACTACTAAATGTATGAAAAGGCGTCGAAGAGATTCATCGGTGTTAGGAGGGAATGAACAACAAGGTGATGTATCAGAAATACAACAGCCATTGATTGGTCAATCAACTGCAACCACTGTGAAGAGAAGCTCAAGGTTTAGGGGTGTTAGTAGGCATAGGTGGACTGGAAGGTATGAAGCTCATTTATGGGATAAAGGGACATGGAATCCTACTCAAAAGAAAAAAGGAAAGCAAGGAGCTTATAACGAGGAAGAAGCTGCTGCTAGAGCTTATGATTTGGCTGCACTCAAATACTGGGGAACATCGACTTTTACAAATTTTCCTGTACCTGAGTATGAGAAAGAAATTGAGATAATGATAAATATGACCAAAGAGGAGTATCTTGCTTCATTGAGAAGGAGGAGCAGTGGCTTTTCTAGAGGTGTATCAAAATATAGAGGAGTAGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGGATTGGAAGAGTGTTCGGCAACAAGTACCTCTACCTCGGAACTTACGGTACACAAGAAGAGGCGGCTCGCGCATACGATATCGCAGCAATTGAATACCGAGGCATAAATGCCGTGACAAACTTCGACTTGAGCACCTACATAAGATGGTTAAGGCCAGGATCAAATCCTACTACATCTCAAGAACAAAAACCAAACACTGAACCTCAACCCTTTGCAGCCACTAGTTTTATTCAAACAAGAGGAAACATTGATGCATCCAACTCCAACATCAATCCAGAAAAGCTTTTGCAAGTTGGAAATACAAAGAAGCAAGAGTTTTCCACCTCTATGATGACCCCTTTAAGTCCTTGCAGTAAACCAGCTTCACCAACAGCATTAGGACTTCTACTAAAATCCTCGGTGTTTCGAGAATTAATGCAAAGAAATCTGAATTCTTCTAATGAAGATGATGAAGAAGTTGAATTGAAATACCATCAAGAGGGGATTAGAGGGGTTTTTGATATTGACAATAACAGTAACACTTATTTGAGCTCTTCTAATATTAGCAGATTACCTAACTTGGAGTCATCAGAAGAGAGGTCATTGCCTATGTTTCATGGAACTATGCAATCCCTATGGAATGGTGCTTCCAACATTTCTAATTGA 1206 0.4055 MEELANVNSELSPRSRRMLMLDADSVVTTKCMKRRRRDSSVLGGNEQQGDVSEIQQPLIGQSTATTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYNEEEAAARAYDLAALKYWGTSTFTNFPVPEYEKEIEIMINMTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGSNPTTSQEQKPNTEPQPFAATSFIQTRGNIDASNSNINPEKLLQVGNTKKQEFSTSMMTPLSPCSKPASPTALGLLLKSSVFRELMQRNLNSSNEDDEEVELKYHQEGIRGVFDIDNNSNTYLSSSNISRLPNLESSEERSLPMFHGTMQSLWNGASNISN* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2574 401 Gene3D AP2/ERF domain 170 231 IPR036955 GO:0003700|GO:0006355
Mal5g2574 401 Gene3D AP2/ERF domain 71 136 IPR036955 GO:0003700|GO:0006355
Mal5g2574 401 MobiDBLite consensus disorder prediction 34 66 - -
Mal5g2574 401 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 395 - -
Mal5g2574 401 SMART rav1_2 171 235 IPR001471 GO:0003700|GO:0006355
Mal5g2574 401 SMART rav1_2 72 141 IPR001471 GO:0003700|GO:0006355
Mal5g2574 401 ProSiteProfiles AP2/ERF domain profile. 171 229 IPR001471 GO:0003700|GO:0006355
Mal5g2574 401 ProSiteProfiles AP2/ERF domain profile. 72 135 IPR001471 GO:0003700|GO:0006355
Mal5g2574 401 CDD AP2 170 231 IPR001471 GO:0003700|GO:0006355
Mal5g2574 401 Pfam AP2 domain 71 127 IPR001471 GO:0003700|GO:0006355
Mal5g2574 401 Pfam AP2 domain 170 221 IPR001471 GO:0003700|GO:0006355
Mal5g2574 401 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 395 - -
Mal5g2574 401 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Mal5g2574 401 PRINTS Ethylene responsive element binding protein signature 211 231 IPR001471 GO:0003700|GO:0006355
Mal5g2574 401 SUPERFAMILY DNA-binding domain 71 136 IPR016177 GO:0003677
Mal5g2574 401 MobiDBLite consensus disorder prediction 42 66 - -
Mal5g2574 401 SUPERFAMILY DNA-binding domain 170 231 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2574 Mal-Chr5 74926926 74929886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2574 68 233 AP2-EREBP Transcription Factor Family AT5G17430 69.822 8.82e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mal5g2574 AP2 3.5e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2574 - - gmx:100799621 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2574 5 74926926 74929886 Mal5g2574 5 74926926 74929886 ECH