Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2537 ATGAAGAAGGAAAAGCAACAGGATGATGAAAAATCGTCTACGAAGAAGGAGCGTCATATTGTTTCTTGGACTCAAGCGGAGGATGATATACTAAGAGAACAGATTAGAATTCATGGAACTGAAAATTGGGCAATTATTGCATCCAAATTCAACGGCAAAACTACAAGACAATGCAGAAGAAGATGGTACACTTATTTGAATGCTAATTTCAAGAAAGATGGATGGACACCAGATGAAGACATGCTCTTATCTGAGGCTCAAAAAGTATTTGGAAACAAATGGACAGAAATAGCAAAGGTGGTTTCAGGGAGAACGGATAATGCTGTAAAAAATCGTTTTTCCACACTCCGCAAGAAGAGGGAAAAAAATGAAAAAAATGAAGCAATAGCAAAAGAGAGGATCATTCCATGCATCGCTTCAAATACCAAGAGGAATATTTCCCATCAGGGTTATAATACAGGCACAACGTCAGAATCTGCTGTGCCAGTTAAAAAAATTAGGAGGGCCCATATCCCTGATGATGCAAAAGAGATGAACTTTGGAGATAGATCGCATTTGCGAAATGCAATTTTAATAAATCAGCAGCCAAGAGCACCATTTGCCGAATTAGCTCAAAAATCTAATAATGTGAACAATGTTCCAGACAGGCATCATGTTTCCAATGACAAGTTCAACAGTTCTGGCCAAAATAACAAATATGAACTCAAAAAAGATGACCCAAAGATACGTGCACTGATTCAAATAATGGATTCAGGAAACATGGAAAGAGTATGGAAGCCACTTCTAGAGTATCTGAACAAAACAGATATCATTGGAGAAAAAATTGCAGTTTTACAGCTTGTAAGTAATATGGTCAAGGAGTTGAAGAGTAGTAATGAGAGAGGGAATTCCCGCTTGAGGAAAATGGAACTAGACAAAAGTTCTGAATACAGGACAGGATTAACTCTGCTGCCTAAGTCAACTGGTACTGGTGATAATTTGGAAAGCTCGTCGAATCAGGATATTGGAACTGAAATGAAAGCTACACATAAGTCAACTGGTACTCGTGATAATTTGGAAAGCTCGTTGAATCAGGATATTGGAACTGAAATGAAAGCTATACATAAGTCAACTGGTGCTGGTGATAATTTGGAAAGCTCGTCGAATCAGGATATTGGAACTGAAATGAAAGCTACACAATTTGGAGTTGAAAAAGAAGTATGTGAAGGTGTGGAAGAGGTTCTTTCTACTGGAAAAGTAGCACAAGATATGATACTATACTCTGAGGAACAGATAAATGCCTCGTCAAGAATGGAGGGTTCCCCTCTTCAAGTGACTCCTATTTTCAGATCCTTGGGTGAAGGAATTCCAACTCCAGAATTTACAGACAGTGAAAAGAACTTCCTAAGAAAAACACTGGGAGTGGAGTCTCCATCTCACAGCCCGTACAAATTGTCACCGTGCATAAGAGCCCTTCGTGATGATCCACGATTCATCTGA 1479 0.3888 MKKEKQQDDEKSSTKKERHIVSWTQAEDDILREQIRIHGTENWAIIASKFNGKTTRQCRRRWYTYLNANFKKDGWTPDEDMLLSEAQKVFGNKWTEIAKVVSGRTDNAVKNRFSTLRKKREKNEKNEAIAKERIIPCIASNTKRNISHQGYNTGTTSESAVPVKKIRRAHIPDDAKEMNFGDRSHLRNAILINQQPRAPFAELAQKSNNVNNVPDRHHVSNDKFNSSGQNNKYELKKDDPKIRALIQIMDSGNMERVWKPLLEYLNKTDIIGEKIAVLQLVSNMVKELKSSNERGNSRLRKMELDKSSEYRTGLTLLPKSTGTGDNLESSSNQDIGTEMKATHKSTGTRDNLESSLNQDIGTEMKAIHKSTGAGDNLESSSNQDIGTEMKATQFGVEKEVCEGVEEVLSTGKVAQDMILYSEEQINASSRMEGSPLQVTPIFRSLGEGIPTPEFTDSEKNFLRKTLGVESPSHSPYKLSPCIRALRDDPRFI* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2537 492 ProSiteProfiles Myb-like domain profile. 22 66 IPR001005 -
Mal5g2537 492 CDD SANT 22 66 IPR001005 -
Mal5g2537 492 Pfam Myb-like DNA-binding domain 23 83 - -
Mal5g2537 492 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 70 IPR017930 -
Mal5g2537 492 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Mal5g2537 492 SUPERFAMILY Homeodomain-like 20 113 IPR009057 -
Mal5g2537 492 PANTHER TRANSCRIPTION FACTOR MYB88 3 247 - -
Mal5g2537 492 PANTHER MYB PROTEIN-RELATED 413 486 - -
Mal5g2537 492 PANTHER TRANSCRIPTION FACTOR MYB88 413 486 - -
Mal5g2537 492 PANTHER MYB PROTEIN-RELATED 3 247 - -
Mal5g2537 492 CDD SANT 75 116 IPR001005 -
Mal5g2537 492 Gene3D - 11 71 - -
Mal5g2537 492 MobiDBLite consensus disorder prediction 211 234 - -
Mal5g2537 492 SMART sant 19 68 IPR001005 -
Mal5g2537 492 SMART sant 71 119 IPR001005 -
Mal5g2537 492 Gene3D - 73 135 - -
Mal5g2537 492 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 121 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2537 Mal-Chr5 72667248 72673339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2537 13 300 MYB Transcription Factor Family AT2G02820 48.726 3.37e-88 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal5g2537 Myb_DNA-bind_6 4.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2537 K09422 - gmx:100803361 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2537 5 72667248 72673339 Mal5g2537 5 72667248 72673339 ECH