Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2456 ATGGCTGAAGAACAATTTCAAGCAAGTGGAAATTGGTGGGAGACACCAGCTAGAAACATGAGGTTTGAAAGTGTTGAACAACAACAACAACAACAATCTTCTTCCTTTGGTGGTTGGCAACAACAACATGATACTATGTCTGCTTCAGGTAGTTCCTCTGTGGTTTTCCATGATACTACTCAAAAGCTTCAACCTTCAGATTCTTCAACTTCCAATAATGACTCCAACTTGCATATGATGGGTTTAGGACTTTCATCTCAAACCATTGATTGGAATCAAGCAACTTTACTAAGAAGTGAGAAGGCTTCAGAGGGTAGTTTCAGGTCTATGTTGCAAGAAAATTTGAACTCATCAAGCACAAATTTTGAGCAAGAAGGTGGTGGAGTTGGAGTTGGATTGTCTCATCAAGTTAATTGGAGACAAGAAAAGTTATTCTCTAATGAATCTTCAAGCAATGAATTCAAGCAAGTGAATAGAGGTTTCTCTTTAGATCAAACACAATTTAGTCCTCAATATAGCTCTGGAGATAGTAACATGATAAGCCAAATGGATTCTTCAGCTTTATATGGTAACCCTTCAATGTTACAAGGTGTTTTAGGAACTGAAACCAATCAAATTCAACCGCAACATGGTAATTCATTTGATCAAAATCGTTCCATGAATTTTCCATACTCAACTAGCTATGGTTTGAGTACAAATGAGTTAATGCCTTCTTGGTCTAAAGTACCTCATCAAAAACAACAACAGCCAAATAATCAATTGCATTTCACCAACAATGCTCCCTTTTGGAACGCTTCAGAGACTACTATTAAGGATTGTTCATCTAGCTTCTTGCCCCCAATTGCCACACCAAATTTTGGTGCACAAACAAAGAATATATCTGAAGGTAGGGATTCAAGTGGTGTGGTGAAAAAAGTTGGGAATGAGCCTGCACCAAAAAGGTCCAGAAATGAAACCCCATCATCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTTCACCTTTTGGAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCAATTGAATATATCAAATTCCTCCATGAACAAGTGACTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCAATACAGCATCAACAGAGTTCTGGTAAATCTAAGGAAGCAGAGGGTCCAAGGCAAGATCTTAGAAGCAGAGGGCTATGTTTAGTACCAGTTTCTAGTACATTCCCAATGACTCATGAACCCACAGTTGAATATTGGACACCAACATTTGGAGGAACTTTCAGATAA 1314 0.3881 MAEEQFQASGNWWETPARNMRFESVEQQQQQQSSSFGGWQQQHDTMSASGSSSVVFHDTTQKLQPSDSSTSNNDSNLHMMGLGLSSQTIDWNQATLLRSEKASEGSFRSMLQENLNSSSTNFEQEGGGVGVGLSHQVNWRQEKLFSNESSSNEFKQVNRGFSLDQTQFSPQYSSGDSNMISQMDSSALYGNPSMLQGVLGTETNQIQPQHGNSFDQNRSMNFPYSTSYGLSTNELMPSWSKVPHQKQQQPNNQLHFTNNAPFWNASETTIKDCSSSFLPPIATPNFGAQTKNISEGRDSSGVVKKVGNEPAPKRSRNETPSSLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQHQQSSGKSKEAEGPRQDLRSRGLCLVPVSSTFPMTHEPTVEYWTPTFGGTFR* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2456 437 MobiDBLite consensus disorder prediction 1 78 - -
Mal5g2456 437 Gene3D - 327 389 IPR036638 GO:0046983
Mal5g2456 437 MobiDBLite consensus disorder prediction 288 324 - -
Mal5g2456 437 MobiDBLite consensus disorder prediction 381 405 - -
Mal5g2456 437 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 317 366 IPR011598 GO:0046983
Mal5g2456 437 MobiDBLite consensus disorder prediction 21 78 - -
Mal5g2456 437 SMART finulus 328 372 IPR011598 GO:0046983
Mal5g2456 437 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 327 384 IPR036638 GO:0046983
Mal5g2456 437 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 12 425 - -
Mal5g2456 437 CDD bHLH_AtbHLH_like 323 374 IPR045239 -
Mal5g2456 437 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 12 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2456 Mal-Chr5 67954388 67957497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2456 98 437 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 44.444 5.98e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2456 - - gmx:100778697 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2456 5 67954388 67957497 Mal5g2456 5 67954388 67957497 ECH