Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2452 ATGGCCGTCAAAGTTTATATTGTGTACTATTCAATGTATGGACATGTGGAAAGACTAGCAGAAGAAATAAAGAAAGGAGCAGATTCTGTGGATGGTGTTGAGGCCAAACTATGGCAGGTACCTGAGATATTATCAGAAGAGGTGCTTGGTAAGATGAGAGCACCACCAAAGAGTGATACACCGATCATTACCCCCAACGAGCTCGCTGAGGGTGATGGTTTTGTCTTCGGATTTCCAACAAGATTTGGAATGATGGCTGCTCAGTTCAAAGCCTTTCTAGATGCAACTGGAGGTCTATGGAAAACACAAGAGCTTGCCGGTAAGCCTGCTGGAATCTTCTACAGTACTAGTTCCCAAGGCGGTGGACAAGAGACTACAGCGCTCACAGCTATAACTCAATTGGTTCATCATGGAATGTTATTTGTTCCAATTGGGTATACATTTGGTGCTGGAATGTTTGAGATGGAAGAAGTGAAAGGTGGAAGTCCATATGGTTCAGGAACATATGCTGGTGATGGATCAAGACAGCCAACTAAACTTGAGTTAGAGCAAGCATTTCATCAAGGGATGTATATTGCTACCATCACAAAGAAGCTCAAGGAAGCTGCATAA 612 0.433 MAVKVYIVYYSMYGHVERLAEEIKKGADSVDGVEAKLWQVPEILSEEVLGKMRAPPKSDTPIITPNELAEGDGFVFGFPTRFGMMAAQFKAFLDATGGLWKTQELAGKPAGIFYSTSSQGGGQETTALTAITQLVHHGMLFVPIGYTFGAGMFEMEEVKGGSPYGSGTYAGDGSRQPTKLELEQAFHQGMYIATITKKLKEAA* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2452 203 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 1 203 - -
Mal5g2452 203 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1 1 203 - -
Mal5g2452 203 ProSiteProfiles Flavodoxin-like domain profile. 5 191 IPR008254 GO:0010181
Mal5g2452 203 Gene3D - 1 201 IPR029039 -
Mal5g2452 203 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 199 IPR010089 GO:0003955|GO:0010181
Mal5g2452 203 Pfam NADPH-dependent FMN reductase 17 144 IPR005025 GO:0016491
Mal5g2452 203 SUPERFAMILY Flavoproteins 4 200 IPR029039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2452 Mal-Chr5 67719128 67721122 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2452 K03809 - gmx:100793045 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2452 5 67719128 67721122 Mal5g2452 5 67719128 67721122 ECH
Mal4g0986 4 13227530 13229272 Mal5g2452 5 67719128 67721122 PCT