Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2442 ATGATTGATAACATCATAACGTTTGTCCTTTTATGCTATTTACTCTCTTACATAAGAACAATCTCTTCATTAGACACTTTAGCTGTGAATCAATCCATCCGAGATGGTCAGACTTTAGTTTCAGCAAATGGAACTTTTGAAGTCGGTTTCTTCCGTCCTTCTGGAAATTCAAGAGGACGATATTTAGGTATGTGGTATAGGAATTTATCACCATTGACCGTCGTTTGGGTGGCCAACAGAGAAACACCTCTGCAGAATAATTCAGGAATCTTGAAACTCAATGAAAATGGAGTTCTTGTGATTCTTAATGGTGCAAACGACATTATTTGGTCGTCTTATATGTCAAACAAGGTAGTGAATAATTCAATATTCGCGCAGCTGTTAGACACGGGAAACCTTGTGTTGAATATGGGAAAGGACAATATTTTGTGGCAGAGTTTTGATTATCCATGTGATACATTATTGCCTGGAATGAAGCTTGGATGGAACTTAGTAACCGGTCTTGACCGGTTTGTGACATCTTGGAAAAGTGCCGATGATCCAGCAAAGGGAGAGTATTCTATAAAAATTGATAAGAGAGGATTTCCCCAACTAGTTATTATGAAGGGATCTGTCAATAAATTTAGAATGGGCTCCTGGAATGGCCTTGGTTTTACAGGATATCCAACTCAACAATTGAAACAGAAACAAAAGTATAAGTTTGTCTTCAACGAAAAAGAAATTTATCATCAATATGAAGTTGTTGATAGCTCTGTTGTCTCCAATTATTTCGTGTCCACTTCAGGGAATTTGCAGGCTTTAGCTTGGACAAGTAAAAAAAGCGATAGAATAGTTATCTACACAGGGGGAGAGGATTCGTGTGATAATTACGCAATGTGTGGCCCTAATTCTGTATGCAATATGGATGGTAACATTCCCAAATGTGAATGCCTGAAAGGTTATGTTCCTAGATTTCCTGAACAATGGAATATGTCATACTGGTCTAGCGGCTGCGTTTGTGTTAAAAGGATAGAATCTATTTGTGGAGACAATAATTTAAGTGGCTTCTTGAAGTACCAAGAAATGAAATTGCCAGACACTTCTTCATCATGGTATAACAAGACCATGAACCTTGTGGAATGTAAGAAGTCATGCCTTAAAAATTGTTCGTGTACAGCTTATGGAAATTTGGATATCCGACATGGAGGAAGTGGATGTTTGCTTTGGTTTGGTGATCTAGTTGACATGAGGAAATTCTCTCAATGGGGACAAGAGTTTTATATCAGAGTCCCTTCTTCAGTACTAGAACCTGCTGCGGTTAATGGCCATCAAAACAAGAAGAAGATGGGAATCACAGTGGGCGTGATTTCTATTGGTTTAATTATATGTGGTTGTTTAATAATACTTAGAAAGCGAGTGGCGGCGAGAGTATATCTTCTTGCACCATTTCAATGGCAGAAAGAACATTTTAGATTGACACAGGAAGACATGGATCTACCAGTATTTAATCTGTCAATCATTGTTAAAGCCACTAATAATTTTTCTAGTGTAAACAAACTTGGGGAAGGTGGATTTGGACCAGTGTACAAGGGTACACTAACAGATGGAAAAGAAGTTGCCATTAAACGAAACTCAAAATTGTCTGATCAAGGATTGGATGAGTTTAAAAACGAAGTTTTTATGATTGCAAAACTTCAGCATCGAAATCTTGTGAAGCTTCTTGGTTGCTGTATTGAAGGAGAGGAACAGATGTTGATCTACGAATACATGCCCAACAGGAGCTTGGACTACTTTATCTTTGATGAAACAAGAAGCAAGCTCTTGGGCTGGTCTCAACGTTCGTACATTATTGCTGGCATTGCTAGAGGTCTTCTCTACCTTCACCATGATTCAAGACTGAGAATTATTCACAGAGATTTGAAAACTAGCAATATCCTACTAGATGCACATATGAATCCAAAAATATCAGACTTTGGTCTCGCTCGAATATTTGGGGTTGATCAAATTGAAGCCAGAACTAAGAAAATGGTTGGAACATATGGTTACATGCCGCCAGAGTATGCTGTGCATGGCCATTACTCTCTAAAATCAGATGTATTTAGTTTTGGTGTATTAGTACTAGAGATAATCAGCGGGAAAAAGAATAAGGGATTTTCTGATCCAGAACACTCCCTTAACCTTCTTGGACACGCATGGAGACTCTGGACTGAGAACAGATCACTGGAACTGCTAGATAGACACTTACTTGAAACATGTAACTCTTCTGAAGTCTTTAGATGCATACATGTGGGTTTGTTGTGTGTACAACAAAAACCAACCGATAGGCCTGACATGTCTTCTGTCATTCTTATGCTGAATGGCGAGAAATTATTGCCTCAGCCGAAGGTGCCTGGATTTTACACCGGAACGGGTTTACCTGAAGGAATTTCCTTAACCTCAAATGAGATGTCAGTAACTACATTTGTGGCAAGATAG 2454 0.3863 MIDNIITFVLLCYLLSYIRTISSLDTLAVNQSIRDGQTLVSANGTFEVGFFRPSGNSRGRYLGMWYRNLSPLTVVWVANRETPLQNNSGILKLNENGVLVILNGANDIIWSSYMSNKVVNNSIFAQLLDTGNLVLNMGKDNILWQSFDYPCDTLLPGMKLGWNLVTGLDRFVTSWKSADDPAKGEYSIKIDKRGFPQLVIMKGSVNKFRMGSWNGLGFTGYPTQQLKQKQKYKFVFNEKEIYHQYEVVDSSVVSNYFVSTSGNLQALAWTSKKSDRIVIYTGGEDSCDNYAMCGPNSVCNMDGNIPKCECLKGYVPRFPEQWNMSYWSSGCVCVKRIESICGDNNLSGFLKYQEMKLPDTSSSWYNKTMNLVECKKSCLKNCSCTAYGNLDIRHGGSGCLLWFGDLVDMRKFSQWGQEFYIRVPSSVLEPAAVNGHQNKKKMGITVGVISIGLIICGCLIILRKRVAARVYLLAPFQWQKEHFRLTQEDMDLPVFNLSIIVKATNNFSSVNKLGEGGFGPVYKGTLTDGKEVAIKRNSKLSDQGLDEFKNEVFMIAKLQHRNLVKLLGCCIEGEEQMLIYEYMPNRSLDYFIFDETRSKLLGWSQRSYIIAGIARGLLYLHHDSRLRIIHRDLKTSNILLDAHMNPKISDFGLARIFGVDQIEARTKKMVGTYGYMPPEYAVHGHYSLKSDVFSFGVLVLEIISGKKNKGFSDPEHSLNLLGHAWRLWTENRSLELLDRHLLETCNSSEVFRCIHVGLLCVQQKPTDRPDMSSVILMLNGEKLLPQPKVPGFYTGTGLPEGISLTSNEMSVTTFVAR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2442 817 Gene3D Transferase(Phosphotransferase) domain 1 583 784 - -
Mal5g2442 817 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Mal5g2442 817 CDD PAN_AP_plant 342 424 - -
Mal5g2442 817 Gene3D Hepatocyte Growth Factor 341 420 - -
Mal5g2442 817 Gene3D Phosphorylase Kinase; domain 1 474 582 - -
Mal5g2442 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Mal5g2442 817 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Mal5g2442 817 Gene3D - 19 147 IPR036426 -
Mal5g2442 817 CDD B_lectin 30 150 IPR001480 -
Mal5g2442 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 181 IPR036426 -
Mal5g2442 817 ProSiteProfiles EGF-like domain profile. 283 320 IPR000742 -
Mal5g2442 817 CDD STKc_IRAK 513 780 - -
Mal5g2442 817 SMART ntp_6 344 423 IPR003609 -
Mal5g2442 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 815 - -
Mal5g2442 817 Pfam PAN-like domain 343 409 IPR003609 -
Mal5g2442 817 SMART serkin_6 507 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2442 817 Pfam Protein tyrosine and serine/threonine kinase 510 775 IPR001245 GO:0004672|GO:0006468
Mal5g2442 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 15 815 - -
Mal5g2442 817 PIRSF SRK 1 815 IPR024171 GO:0004674
Mal5g2442 817 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Mal5g2442 817 Pfam D-mannose binding lectin 73 176 IPR001480 -
Mal5g2442 817 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2442 817 SMART blect_4 30 150 IPR001480 -
Mal5g2442 817 SUPERFAMILY Protein kinase-like (PK-like) 488 778 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2442 Mal-Chr5 67365173 67368360 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2442 425 796 Receptor kinase-like Gene Family AT4G05200 52.219 3.63e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2442 PK_Tyr_Ser-Thr 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2442 - - aprc:113865090 1173.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2442 5 67365173 67368360 Mal5g2442 5 67365173 67368360 ECH