Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2439 ATGGATATCCGAAATGGAGGAAGCGGTTGTTTGCTTTGGTTTGATAATCTAGTTGACATGAGAGTATTTTCTCAATGGGGACAAGATCTTTATATCAAAGCCCCTTCTTCAGAATTAGATGATGTTAGTGTTAATGGCAACGGAAACCAGAAGAAGCAGCTAATACAGATCACAGTTGGCGTGATAATTTCCGGATTCCTTACATGTGCTTGCTTAGTAATATTTATAAAGCGAGTTGCACGGAGAGTACATCATCTAGCACCGTTTAAATGGAGGAAAGAATATTCCCGTTTGAGGAAAGAGGACTCGGATCTGCTAATATTTGATTTTTCAATCATTGTTAAAGCAACTAATAATTTTTCTACCAGAAACAAACTTGGGGAAGGTGGATTTGGACCAGTTTATAAGGGTACCCTGATAGATGGAAAAGAGGTAGCCATAAAACGGAACTCTAAGATGTCTGATCAAGGGATTGAGGAATTTAAAAACGAAGTCTTGTTGATTGCAAAACTTCAGCACCGTAATCTTGTGAAGCTTCTTGGTTTCTGTATTCATAAAGAGGAAAAATTGTTGATCTATGAATACATGCCCAATAGGAGCTTAGAGTACTTCATCTTTGATGAAACTAGAAGCAAACTCTTATCCTGGTCGAAGCGTTCCCATATTATTGATGGCATTGCTAGAGGACTTCTTTATCTTCACCAGGACTCGAGACTTAGAATTATTCACAGAGATTTAAAGCTAAGCAATATCTTACTAGATGCCCATATGGATCCGAAAATATCAGATTTTGGCCTAGCTCGGACATTTTGTGGAGATCAAGTTGAAGCGAAAACAAGAAAATTGGTTGGAACATATGGCTACATGCCTCCGGAGTATGCTGTGCATGGTCGTTACTCCATGAAATCAGATGTGTTTAGTTTTGGAGTAATAATATTGGAGATAATCAGTGGGAAAAAGATTAAGGTGTTTTTTGACACAGAACACTCTCTCAACCTTCTTGGACATGCATGGAGACTCTGGACAGAAAACATGGCTCTGGAACTGGTTGATAAGCAGTTATTTGAAACAATCGCTTATTCTGAAATCTTACGATATATGCATGTTGGGTTGTTGTGCGTTCAAGAAAAACCGGGAGATAGACCAGACATGTCATCTGTAATTTATATGCTAAATGGTGAGAAGTTATTGTCTCAGCCGAAAGCTCCGGGATTTTATACTGGAAGGGTCTTACCTGAAACAATAACGCCAACTTCAAATCATATGTCAATTACAATTTTTGAGGCAAGATAG 1293 0.3828 MDIRNGGSGCLLWFDNLVDMRVFSQWGQDLYIKAPSSELDDVSVNGNGNQKKQLIQITVGVIISGFLTCACLVIFIKRVARRVHHLAPFKWRKEYSRLRKEDSDLLIFDFSIIVKATNNFSTRNKLGEGGFGPVYKGTLIDGKEVAIKRNSKMSDQGIEEFKNEVLLIAKLQHRNLVKLLGFCIHKEEKLLIYEYMPNRSLEYFIFDETRSKLLSWSKRSHIIDGIARGLLYLHQDSRLRIIHRDLKLSNILLDAHMDPKISDFGLARTFCGDQVEAKTRKLVGTYGYMPPEYAVHGRYSMKSDVFSFGVIILEIISGKKIKVFFDTEHSLNLLGHAWRLWTENMALELVDKQLFETIAYSEILRYMHVGLLCVQEKPGDRPDMSSVIYMLNGEKLLSQPKAPGFYTGRVLPETITPTSNHMSITIFEAR* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2439 430 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 2 428 - -
Mal5g2439 430 Pfam Protein kinase domain 121 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2439 430 SUPERFAMILY Protein kinase-like (PK-like) 103 413 IPR011009 -
Mal5g2439 430 Gene3D Transferase(Phosphotransferase) domain 1 196 401 - -
Mal5g2439 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Mal5g2439 430 SMART serkin_6 120 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2439 430 Gene3D Phosphorylase Kinase; domain 1 83 195 - -
Mal5g2439 430 ProSiteProfiles Protein kinase domain profile. 120 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2439 430 CDD STKc_IRAK 126 393 - -
Mal5g2439 430 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2439 Mal-Chr5 67272769 67274827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2439 103 405 Receptor kinase-like Gene Family AT4G23230 57.237 1.51e-125 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2439 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2439 - - mtr:MTR_8g465570 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2439 5 67272769 67274827 Mal5g2439 5 67272769 67274827 ECH