Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2438 ATGATTGATACCATCAAAGTGTTATTCTGCTTGTTCTTTTCGATCTCCTACTTGAGGACAAGTACTTCACTTGATAGTTTAGCCGCAAATCAATCTATCCGAGATGGCCAGACATTAGTTTCTGCTAATGGAACTTTTGAAATGGGTTTTTTCAGTCCTGGAAATTCAAAAGATCGGTATTTGGGTATGTGGTACAAGAATTTAACACCTTTAACAGCTGTTTGGGTGGCTAACAGGGAAACACCAGTGCAGAATAACTTAGGAGTTTTAAAACTCAATGAAAATGGTGTTCTTGTTATTCTCAATTCTACAAACATCATTGTTTGGTCGTCCGACATATCCAACAAAGTTGTCAATAGTTCAATAACGGCACAACTCTTGGACACAGGAAATCTTGTGTTAAAAGTGGGACAGGATACTACAAATGAGGATAATATTTTGTGGCAGAGTTTTGATTATCCATGTGATACATTATTGCCGGGAATGAAGCTTGGATGGAACTTATTAACCGGTCTAAACAAGATGCAAACGTCGTGGAAAAGTACAGATGATCCAGCAAAGGGGGAATATTCAAGTGGTGTTGACCTCAGAGGATATCCGCAAGTAGTTATTAAGAAAGGATCTGTCATAAAATTGAGAGTAGGATCATGGAATGGTCTTTCCTTTACAGGATATCCAACACAACCGTTGAAACAAAAGCAAAGATTTGAATTTGTTATAACTGACAAAGAAGTGTATCATGGATATGAAGTTGTCGACCGATCGATGATTTGTGTATATAGATTGTCCCTTATAGGAAACTTGCAGGCTTTATGTTGGACAAGTCACTCAAGCTCTAGGATGGTTATCTACACCGGCGCGGAAGATTCATGCGATAATTATGCTATGTGTGGTGCTAATTCTATATGCAATATGGATGGTAACGTTCCTCAATGTAAATGCCTGAAAGGTTATGTTCCTAAGTTTCCTGAACAATGGAATATATCATATTGGTCTAGTGGTTGTATTCCAAAAATTGAATTAGTTTGTGGAAACAATAATACAAGTGGCTTCTTGAGGTACAGAGAAATGAAATTGCCAGACACTTCTTCAACATGGTATAATAAGACTATGAACCTTGTGGAATGTCAAAAAGTGTGTATGAAAAATTGTTCGTGTACCGGTTATGCAAATATGGATATCCGAAATGGAGGTAGTGGCTGTCTTCTTTGGTTGGGTGATCTTGTTGACATGAGAGTATTCTCCCAATGGGGACAAGATCTCTATATCAAAGTCCCTTCTTCAGAACTAGATTACCTAAATTTTGATGTCCGTGGAAGCACGAAAAAGCGGCTGATGCAGTTCACAGTTGGCCTCATTGCTGTTGGATTTATCACATGTGCCTGCATAATAATATTTATATGGAGAGTGGCACCGAGGTTATATCGTCTTGCACCATTTCAAAAACGACATGTATATTCTAGATTGATAAAGGAAGACATGGATCTACCAATATTTGATTTTTCAATCCTAGTTAAAGCCACTAATAACTTTTCTAGTATAAATAAACTTGGGGAAGGTGGATTTGGACCAGTGTATAAGGGAACACTCGTAGACGGGAAGGAGGTAGCCATAAAACGGCACTCAAAGGTGTCAGATCAAGGATTGGAGGAGTTTAAAAATGAAATTGTGTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTCATAGAGAGGAAATGTTGTTGATGTATGAATACATGCCCAACAAGAGCTTAGACTATTTCATCTTTGATGAAACCAGAAGCAAGCTCTTGGGATGGACTCACCGTTCCAACATTATAGCTGGCATTGCTAAAGGACTTCTTTATCTTCACCAAGACTCTAGACTCAGAATTATACATAGAGATTTGAAAACCAGCAATATCCTATTAGATGCTCATATGATTCCCAAAATATCAGATTTTGGCTTGGCTCGGACATTTGGGGGAGATCAAGTCGAAGCCAAAACAAAAAAAATGGTTGGGACATATGGTTACATGCCTCCAGAGTATGCAGTGCATGGTCGTTACTCCATGAAATCCGATGTGTTTAGTTTTGGCGTAATAATATTGGAAATAATCAGTGGGAATAAAATTAAGGGGTTTTATGACTCAGAACACTCTCTCAACCTCCTTGGACATGCTTGGAGACTCTGGATTGAAAACATGCCACTGGACCTACTAGATACACATTTATTTGAGATGTGCATTTCTTCTGAAGTCATAAGATGCATACATGTGGGGTTGTTATGTGTACAACAAAAACCTGGAGATAGGCCAGACATGTCCTCTGTCATTCTTATGTTGAATGGTGAGAAATTATTGCCTCAGCCGAAGGCTCCTGCATTTTATACCGGAAACACTTCAACTGAAACCTCCTCCCCATCCTCGAATCAGATGTCACTTACATATTTTGAGGCAAGATAG 2466 0.3865 MIDTIKVLFCLFFSISYLRTSTSLDSLAANQSIRDGQTLVSANGTFEMGFFSPGNSKDRYLGMWYKNLTPLTAVWVANRETPVQNNLGVLKLNENGVLVILNSTNIIVWSSDISNKVVNSSITAQLLDTGNLVLKVGQDTTNEDNILWQSFDYPCDTLLPGMKLGWNLLTGLNKMQTSWKSTDDPAKGEYSSGVDLRGYPQVVIKKGSVIKLRVGSWNGLSFTGYPTQPLKQKQRFEFVITDKEVYHGYEVVDRSMICVYRLSLIGNLQALCWTSHSSSRMVIYTGAEDSCDNYAMCGANSICNMDGNVPQCKCLKGYVPKFPEQWNISYWSSGCIPKIELVCGNNNTSGFLRYREMKLPDTSSTWYNKTMNLVECQKVCMKNCSCTGYANMDIRNGGSGCLLWLGDLVDMRVFSQWGQDLYIKVPSSELDYLNFDVRGSTKKRLMQFTVGLIAVGFITCACIIIFIWRVAPRLYRLAPFQKRHVYSRLIKEDMDLPIFDFSILVKATNNFSSINKLGEGGFGPVYKGTLVDGKEVAIKRHSKVSDQGLEEFKNEIVLIAKLQHRNLVKLLGCCIHREEMLLMYEYMPNKSLDYFIFDETRSKLLGWTHRSNIIAGIAKGLLYLHQDSRLRIIHRDLKTSNILLDAHMIPKISDFGLARTFGGDQVEAKTKKMVGTYGYMPPEYAVHGRYSMKSDVFSFGVIILEIISGNKIKGFYDSEHSLNLLGHAWRLWIENMPLDLLDTHLFEMCISSEVIRCIHVGLLCVQQKPGDRPDMSSVILMLNGEKLLPQPKAPAFYTGNTSTETSSPSSNQMSLTYFEAR* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2438 821 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Mal5g2438 821 ProSiteProfiles Protein kinase domain profile. 511 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2438 821 Gene3D - 19 151 IPR036426 -
Mal5g2438 821 Gene3D Transferase(Phosphotransferase) domain 1 587 790 - -
Mal5g2438 821 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Mal5g2438 821 SMART ntp_6 346 425 IPR003609 -
Mal5g2438 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Mal5g2438 821 ProSiteProfiles EGF-like domain profile. 287 324 IPR000742 -
Mal5g2438 821 CDD STKc_IRAK 517 784 - -
Mal5g2438 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
Mal5g2438 821 CDD PAN_AP_plant 343 426 - -
Mal5g2438 821 ProSiteProfiles PAN/Apple domain profile. 343 426 IPR003609 -
Mal5g2438 821 Pfam D-mannose binding lectin 72 180 IPR001480 -
Mal5g2438 821 Pfam PAN-like domain 343 411 IPR003609 -
Mal5g2438 821 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 15 818 - -
Mal5g2438 821 Gene3D Hepatocyte Growth Factor 343 421 - -
Mal5g2438 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Mal5g2438 821 SMART serkin_6 511 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2438 821 Pfam Protein kinase domain 512 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2438 821 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 818 - -
Mal5g2438 821 SMART blect_4 30 154 IPR001480 -
Mal5g2438 821 CDD B_lectin 30 154 IPR001480 -
Mal5g2438 821 SUPERFAMILY Protein kinase-like (PK-like) 495 802 IPR011009 -
Mal5g2438 821 Gene3D Phosphorylase Kinase; domain 1 478 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2438 Mal-Chr5 67264615 67268096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2438 481 802 Receptor kinase-like Gene Family AT4G11480 56.667 1.98e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2438 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2438 - - mtr:MTR_8g465580 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2438 5 67264615 67268096 Mal5g2438 5 67264615 67268096 ECH
Mal5g2438 5 67264615 67268096 Mal4g1004 4 13736114 13740637 PCT