Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2437 ATGATTGATTTTAGCATCAAAGATTTGATCATTTTGTTCCTTTTATCTTCATTCATGAGAGGATGCACTTCACTAGACACTTTATCTCTGAATCAAACTATCCTTGATGGCCAGAATTTGGTTTCAGCACATGGAACTTTTGAACTTGGTTTCTTCAGTCCAGGGAATTCTAGAGCAAGATATTTAGGTATGTGGTACAAAAATTTAACCCCTTTAACATATGTGTGGGTGGCTAATAGGGAAACACCACTCCACAATAATTTAGGAGTCTTAAAACTCAATGAAAATGGAGTTCTTGTGATTCTCAATGTCACAAACAACATCATTTGGTCCTCGAATGCATCAAACATAGCCGTGAAAAATTCAGTGACAGCACAACTATTGGACACTGGGAATCTTGTGTTGAAAAATGGGAAGGAAAATATTTTGTGGCAGAGTTTTGATTATCCATGTGATACATTATTGCCTGGAATGAAGCTTGGATGGAACTTATTAACCGGTCTAAACATGTTCGAATCGTCTTGGAAAAGTGCAGATGATCCATCTAAGGGAGATTATTCTGTAAATATTGATATCAGAGGATATCCTCAACTTGTTATCATGAAGGGATCTGACATAAGATTGAGAATAGGATCATGGAATGGACAAACTTTTACCGGATATCCAACACAACCATTGGAACAAAAGCAAAGGTTTGAGTTTGTCATGAATCAAAAAGAAGTGTATCATCGGTATGATGTTGTTGATAGTTCTGTAGTATCTATATATAAACTCTCCCCTTCAGGAAATTTGCAGGCTTTAGCTTGGACAAGTGAAACAAGCGATAGGATAGTGATCGAAACTGGAATGCAAGATTCGTGTGATAGTTATGCAATGTGTGGTGCTAATTCTGTATGCAATATGGACGGAAACGTTCCTAAATGTGAATGTTTAAAAGGTTATGTTCCTAAGTTTCCAGAACAATGGAATATATCATACTGGTCTAGAGGTTGTGTTCCAAAAAATAAGTCTTTTTGTGCAAACAATGACACAAGTAGTTTCTTGAAATACAGAGGAATGAAATTGCCAGACACAACGTCTACATGGTACAATAAAACCATGAACCTTGTTGAATGTCAAAAGGCGTGTATGAAAAATTGTTCATGTACGGCTTATACAAATGTGGATATCCGAAATGGAGGAAGCGGTTGTTTGCTTTGGTTTAATGATCTGGTTGACATGAGAATATTTTCTCAATGGGGACAAGATCTTTATATTAAAGTCCCTTCTTCAGAATTGGATGATGTTAGTGTTAATGGAAACGGAAACCAGAAGAAGCAGCTGATACGGATCACAGTTGGCGTGATAATTTCCGGATTCCTAACATGTGCTTGCTTAGTAACATTTATAAAGAGAGCGGCTCTGAGAGTACGTCATCTGGCACCGTTTCAATGGAGGAAAGAATATGCCCGATTGAGGAAAGAAGACTCGGATCTGCCAATATTTGAGTTTTCAATCATTCTTAAAGCAACTAATAATTTTTCTAGCAGAAACAAACTTGGGGAAGGTGGATTTGGACCAGTTTATAAGGCTACCCTGATAGATGGAAAAGAGGTAGCCATAAAACGGAACTCTAAGATGTCTGATCAAGGCTTGGAGGAATTTAAAAACGAAGTCTTGTTGATTGCAAAACTTCAGCACCGTAATCTAGTGAAGCTTCTTGGTTTCTGTATTCATAAAGAGGAAAAATTGTTGATCTATGAATACATGCCCAATAGGAGCTTAGAGTACTTCATCTTTGATGAAACTAGAAGCAAGCTCTTATCCTGGTCGAAGCGTTCCCAAATTATTGATGGCATTGCTCGAGGACTTCTTTATCTTCACCAAGACTCTAGACTTAGAATTATTCACAGAGATTTAAAGCTAAGCAATATCTTACTAGATGCCCATATGAATCCAAAAATATCAGATTTTGGCCTAGCTCGGACGTTTTGTGGAGATCAAGTTGAAGCTAAAACAAGAAAATTGGTTGGAACATATGGCTACATGCCTCCGGAGTATGCAGTGCATGGTCGTTACTCCATGAAATCAGATGTGTTTAGTTTTGGAGTAATAGTATTGGAGATAATCAGTGGAAAAAAAATTAAGGTTTTTTTTGACACTGACCACTCTCTCAACCTTCTTGGACATGCATGGAGACTCTGGACACAAAACATGGCTTTGGAACTGGTTGATGTGCACTTATTTGAAACAATCTCTTATTCTGAAATCTTACGATATATCCATGTTGGGTTGTTGTGCGTTCAAGAAAAACCGGGAGATAGACCAGACATGTCATCTGTAATTCTTATGCTAAATGGTGAGAAATTATTGTCTCAGCCGAAAGCTCCTGGATTTTATACTGGAAGGGTCTTACCTGAAACAATATCGCCAACTTCAAATCAGATATCAATTACAATTTTTGAGGCAAGATAG 2454 0.3741 MIDFSIKDLIILFLLSSFMRGCTSLDTLSLNQTILDGQNLVSAHGTFELGFFSPGNSRARYLGMWYKNLTPLTYVWVANRETPLHNNLGVLKLNENGVLVILNVTNNIIWSSNASNIAVKNSVTAQLLDTGNLVLKNGKENILWQSFDYPCDTLLPGMKLGWNLLTGLNMFESSWKSADDPSKGDYSVNIDIRGYPQLVIMKGSDIRLRIGSWNGQTFTGYPTQPLEQKQRFEFVMNQKEVYHRYDVVDSSVVSIYKLSPSGNLQALAWTSETSDRIVIETGMQDSCDSYAMCGANSVCNMDGNVPKCECLKGYVPKFPEQWNISYWSRGCVPKNKSFCANNDTSSFLKYRGMKLPDTTSTWYNKTMNLVECQKACMKNCSCTAYTNVDIRNGGSGCLLWFNDLVDMRIFSQWGQDLYIKVPSSELDDVSVNGNGNQKKQLIRITVGVIISGFLTCACLVTFIKRAALRVRHLAPFQWRKEYARLRKEDSDLPIFEFSIILKATNNFSSRNKLGEGGFGPVYKATLIDGKEVAIKRNSKMSDQGLEEFKNEVLLIAKLQHRNLVKLLGFCIHKEEKLLIYEYMPNRSLEYFIFDETRSKLLSWSKRSQIIDGIARGLLYLHQDSRLRIIHRDLKLSNILLDAHMNPKISDFGLARTFCGDQVEAKTRKLVGTYGYMPPEYAVHGRYSMKSDVFSFGVIVLEIISGKKIKVFFDTDHSLNLLGHAWRLWTQNMALELVDVHLFETISYSEILRYIHVGLLCVQEKPGDRPDMSSVILMLNGEKLLSQPKAPGFYTGRVLPETISPTSNQISITIFEAR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2437 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 815 - -
Mal5g2437 817 SMART serkin_6 507 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2437 817 ProSiteProfiles EGF-like domain profile. 283 320 IPR000742 -
Mal5g2437 817 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Mal5g2437 817 Gene3D Phosphorylase Kinase; domain 1 473 582 - -
Mal5g2437 817 CDD B_lectin 31 150 IPR001480 -
Mal5g2437 817 Pfam Protein kinase domain 509 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2437 817 PIRSF SRK 4 816 IPR024171 GO:0004674
Mal5g2437 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Mal5g2437 817 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Mal5g2437 817 Pfam PAN-like domain 339 407 IPR003609 -
Mal5g2437 817 Gene3D - 22 147 IPR036426 -
Mal5g2437 817 Gene3D Transferase(Phosphotransferase) domain 1 583 788 - -
Mal5g2437 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 181 IPR036426 -
Mal5g2437 817 SUPERFAMILY Protein kinase-like (PK-like) 490 790 IPR011009 -
Mal5g2437 817 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2437 817 CDD STKc_IRAK 513 780 - -
Mal5g2437 817 SMART blect_4 31 150 IPR001480 -
Mal5g2437 817 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Mal5g2437 817 Gene3D Hepatocyte Growth Factor 337 417 - -
Mal5g2437 817 SMART ntp_6 342 421 IPR003609 -
Mal5g2437 817 Pfam D-mannose binding lectin 73 176 IPR001480 -
Mal5g2437 817 CDD PAN_AP_plant 341 422 - -
Mal5g2437 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2437 Mal-Chr5 67135986 67139280 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2437 495 792 Receptor kinase-like Gene Family AT4G23230 58.528 2.81e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2437 Pkinase 3.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2437 - - mtr:MTR_8g465570 1315.06