LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g2413	ATGGTACTATGTAGTGCACAAGGGAGAGCTAAATATTTGCTTCTTTTCACATACTTGTGCTTATGGTGGTGGTGGTGTACTAATAATACTACTTGTATCTATGTTAAAGCAGAAAATGGTAGTTTGAAGCCAGGAGATAAGCTGAATGCCACATCCAAACTATGTTCTAAACATGGTAAATGTTGCATGAATTTTGAACCAAAACCTGATTCTAAAAACCTTGCTTATCTCCGTATATACCTTAAAGGAAATGATTATTGGTATTTGTGGATAGCTAATAGAGACCAACCTGTTGACATGGAGTCTGCAGTACTATCACTAAACCAATCTGGTGCACTCAAAATAGAATCCAATACTGGGGAACCAATAATCCTATATGCTTCACCTCAACCTTTGAACAGAAGCAGTACTATTGTGGCCACCTTGTTGGATACAGGCAACTTTGTGTTGCAAGATATTCAGTCCAATGGTAGTAATTTTTTGTGGCAAAGTTTTGATCATCCTATTGATAGTTTTCTCCCTGGGATGAAATTAGGTGTGAATCACAAAAATGGTCATAATTGGTCGCTGGTTTCATGGCTTACCGATAAAATCCCAGCTTCTGGTCCATTTAGACTTGATTGGGAACCCATAGGAAAAGAGTTGCTCATTAGGCATAGAGAAGAAGTTTACTGGAGAAGTGGAAAGTTGAAAGATGATAATAAATTTGAGCATATGGCTGCACATAAAGATGTTCAGTACATAACTGTGTCCAATAAGGATGAAGAGTACATCCAATTTACAAACTCAAATGAAGAAGACATTACTATATTGGATCTATTATCAGTTGGGAGTTTGATAAACAGAAACGGATATACTATAGCACAGGCTGATGTGTGTTATGGGTACAACACTGATGGAGGGTGTCAAAAGTATGAGGAGTTACCCAATTGCAGGAATCGCGGTGACATGTTTGAGGTGAAATCAGGTTATCCCAATCCTAAAAAGTTATATGATATAGGAAAGGCTAATTTTAGTATAAGTGATTGTCAAGCTAGTTGTTGGAGAAATTGCAGCTGCTTTGGATTCAAAGAATCTAATGATAATGGAACCGGTTGTGTGTTCATTCTATCATTCGATGGTTTTAATATTGTAGATGGTGGTAAAAAACTTTACATTCTACGTAAGCGTATCCAAGGTAGTAAACACAAATCGTCATGGATATGGATAAGTGTTGCAATAGCTACTACTTCTATGCTCATAATTTGTGGATACGTTCTGTATCGAGCGAAAATGAAACGAAAGTATATGATTCGAGAAAATGATAGAAACATAATGAGGACTGAGATACAACATCTTGAAAGTTCCAAGGGATCCTCTAGTGGCATTCATCTAGAAGTTGATTTAAGCAAAGAGGATGCCTTGAAAGTATTTAGCTATTCATCAATAATGGTGGCAACCAATGACTTTTCATTTGAAAACAAGTTAGGACAGGGTGGCTTTGGATCTGTTTTTAAGGGAATTCTACCTTCTAGGCAAGAAATAGCTGTGAAAAGACTTTCAAAAACTTCTGGACAAGGAGTTATTGAATTTAAAAACGAATTAGCACTCGTATGTAAGCTCCAGCATACGAATCTGGTTCGGCTGCTAGGTCATTGCATTCACGAAGAAGAGAGACTCTTGATCTATGAGTATCTGTCAAATAAAAGTTTGGACTTCTTTTTATTTGATTCCACTAGAAGAAAGTTGCTAGATTGGAATAAACGCTTTAGCATAATCGAAGGAATTGCTCAAGGATTATTGTATCTTCACAAATACTCAAGACTCAGAATTATCCACAGGGATTTGAAGCCTAGTAACATACTCCTTGATGAAAACATGAACCCCAAAATTTCTGATTTTGGTGTTGCAAGAATGTTTATGAAACAGGAATGTGAAGCAAATACCAACAGGATTGTTGGGACATATGGTTACATGTCTCCCGAGTATGCCATGGAAGGAGTTTTCTCTACAAAGTCTGATGTGTATAGCTTTGGAGTGATGGTCCTTGAAATTGTTAGTGGTAGAAAAAATAATAGCTTTTGTAATGAAGACAAGCCACTACTTAATCTAGTAGGACATGCATGGGAGCTATGGAATGAAGGCACGGTTCTTCAGTTGGTGGATTCAACACTAAATGATTTGTTTTCTAAGGAAGAGGTGCTACGATGCGTTCATATTGGTATGTTGTGCGTAGAAGAAAATGCAGATGATCGCCCCACCATGTCAAATGTTATATCAATGTTAACAAATCAAAGTACAGTGGATATTTTGCCTAAGAAACCAGCATACTATGTTAGATCAAGTGTATTCGAGGAAGAAACGTCTGTTGAAGAATTCAGTGTGGATTCTACTTCTACATATTAA	2385	0.3694	MVLCSAQGRAKYLLLFTYLCLWWWWCTNNTTCIYVKAENGSLKPGDKLNATSKLCSKHGKCCMNFEPKPDSKNLAYLRIYLKGNDYWYLWIANRDQPVDMESAVLSLNQSGALKIESNTGEPIILYASPQPLNRSSTIVATLLDTGNFVLQDIQSNGSNFLWQSFDHPIDSFLPGMKLGVNHKNGHNWSLVSWLTDKIPASGPFRLDWEPIGKELLIRHREEVYWRSGKLKDDNKFEHMAAHKDVQYITVSNKDEEYIQFTNSNEEDITILDLLSVGSLINRNGYTIAQADVCYGYNTDGGCQKYEELPNCRNRGDMFEVKSGYPNPKKLYDIGKANFSISDCQASCWRNCSCFGFKESNDNGTGCVFILSFDGFNIVDGGKKLYILRKRIQGSKHKSSWIWISVAIATTSMLIICGYVLYRAKMKRKYMIRENDRNIMRTEIQHLESSKGSSSGIHLEVDLSKEDALKVFSYSSIMVATNDFSFENKLGQGGFGSVFKGILPSRQEIAVKRLSKTSGQGVIEFKNELALVCKLQHTNLVRLLGHCIHEEERLLIYEYLSNKSLDFFLFDSTRRKLLDWNKRFSIIEGIAQGLLYLHKYSRLRIIHRDLKPSNILLDENMNPKISDFGVARMFMKQECEANTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVMVLEIVSGRKNNSFCNEDKPLLNLVGHAWELWNEGTVLQLVDSTLNDLFSKEEVLRCVHIGMLCVEENADDRPTMSNVISMLTNQSTVDILPKKPAYYVRSSVFEEETSVEEFSVDSTSTY*	795

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g2413	794	Pfam	PAN-like domain	311	368	IPR003609	-
	Mal5g2413	794	SUPERFAMILY	Protein kinase-like (PK-like)	467	777	IPR011009	-
	Mal5g2413	794	SMART	blect_4	45	168	IPR001480	-
	Mal5g2413	794	Gene3D	Phosphorylase Kinase; domain 1	445	558	-	-
	Mal5g2413	794	ProSiteProfiles	Bulb-type lectin domain profile.	39	163	IPR001480	-
	Mal5g2413	794	PANTHER	CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN	14	779	-	-
	Mal5g2413	794	SMART	serkin_6	483	755	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal5g2413	794	Gene3D	Transferase(Phosphotransferase) domain 1	559	767	-	-
	Mal5g2413	794	PIRSF	SRK	282	794	IPR024171	GO:0004674
	Mal5g2413	794	PIRSF	SRK	10	293	IPR024171	GO:0004674
	Mal5g2413	794	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	14	779	-	-
	Mal5g2413	794	Gene3D	-	33	165	IPR036426	-
	Mal5g2413	794	ProSiteProfiles	Protein kinase domain profile.	483	761	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal5g2413	794	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	604	616	IPR008271	GO:0004672\|GO:0006468
	Mal5g2413	794	Pfam	Protein tyrosine and serine/threonine kinase	484	755	IPR001245	GO:0004672\|GO:0006468
	Mal5g2413	794	Pfam	D-mannose binding lectin	89	193	IPR001480	-
	Mal5g2413	794	SUPERFAMILY	alpha-D-mannose-specific plant lectins	87	195	IPR036426	-
	Mal5g2413	794	ProSitePatterns	Protein kinases ATP-binding region signature.	489	511	IPR017441	GO:0005524
	Mal5g2413	794	CDD	STKc_IRAK	489	757	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g2413	Mal-Chr5	66089956	66093010	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal5g2413	461	792	Receptor kinase-like Gene Family	AT3G45860	56.156	1.03e-125	390

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mal5g2413		PK_Tyr_Ser-Thr	1.7e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g2413	-		-	gmx:100816869	882.863