Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2384 ATGTATTTAGTTCGGGTTCATTTCTGTGACATCATTAGCAATTCACTGAACAAAAATATGGTTTTTAATTTATTTATAAATGGAGCATTTGCAGTTAGAGGCGTCAATCTCACATCCAAAATCAGGGAACTTGCTGTGCCATATTACTATGACTTCATCTCCCACACCTCAGGAAACACTTTGAAAGTGAGTGTGGTGGGTGTTAATGCTGATACAATTAAAGAAACGTTAAATGCAATCTTGAATGGTGTCGAGATATTTAAGATTAACAACAATGTAAGTAGGTTGAATGAGTTTTCTGCTTTTGAATTTTTTCATTCTACCTTACCAGAAAATAAAACGAGTTTTTCACATTCACCGAAAAGTGGGAAACAAGGGATTTGGTGGGCTATGATATTAACTAGTTGCAGTGTGTGTGTTTTGGCGTTTCTGGCATTTTGTTACTTGAAAGGTCTCAGAAGGAAGAATAAATCAGTAACCAGTTTTAAGTTTCTCAGACATTTTACTTTGCATGAGATGCAACAAGCAACAAATTGTTTTGATGTTGTGCTTCTTATTGGAGCAGGAGGATTTGGAAAGGTGTATAAAGGAAAACTAGAAAATGGGAAAGTAGTAGCCATCAAAGTAGCAAATCCTGAATCTAGACAAGGTCTCAGTGAATTCCATAACGAAATTGAGTTGTTGTATGGTCTTCGGCATTCAAACCTTGTCTCTCTAGTAGGTTGTTGTAATGAAGACTCAGAACTGATTCTGGTGTACAATTACATGGCAAATGGATCTCTCAGCAGTCATCTATATGGGAAGGACTTTGTTCCTCTAACTTGGAAGCATCGTCTTGAGATATGTTTAGGGGCTGCGAAGGGACTTCTTTATCTTCACACTGGAGCTAAACAAAGCATAATTCACCGTGATGTGAAGACAACAAACATTCTATTGGATGAAAATCTTGTGCCAAAAGTAGCTGATTTTGGCATATCAAAAAAGGGTCCTCTTCTTGATAAGAGCCATGTTACAACAAATGTAAAGGGTAGCTTCGGCTATCTTGATCCAGAATATTTTAGGACTAAGTTTCTTACTAAGAAATCGGATGTTTACTCGTTTGGGGTGGTGTTGATGGAAGTTATATGTGGGAAGCCTGCTCTCGATGATGACCTTCCAACGCAGCAGAAGAATTTGGCATTGTGGGCATTAAGCTGCCATAAAAGGGGTACTTTCAATGAAATGGTGGACCCGTATTTGATTGGAAAATTGAATATGGATTCACTAAACAAGATTTTAGAGTTGGCTTGGAAGTGCTTGGAGGAGCGTCGGGCGAACAGACCACCAATGGGGTACGTATTATGTCAACTAGAAGAGGCTCTCCATCTTGAGTTGGCATCACATGTTTTGAATGGCAATAATAATGGGGATTCTTCTACTTATGCCAGTGTAGGAAATGGATTTACAGATGACATAGAAGATGTTGTATGA 1470 0.383 MYLVRVHFCDIISNSLNKNMVFNLFINGAFAVRGVNLTSKIRELAVPYYYDFISHTSGNTLKVSVVGVNADTIKETLNAILNGVEIFKINNNVSRLNEFSAFEFFHSTLPENKTSFSHSPKSGKQGIWWAMILTSCSVCVLAFLAFCYLKGLRRKNKSVTSFKFLRHFTLHEMQQATNCFDVVLLIGAGGFGKVYKGKLENGKVVAIKVANPESRQGLSEFHNEIELLYGLRHSNLVSLVGCCNEDSELILVYNYMANGSLSSHLYGKDFVPLTWKHRLEICLGAAKGLLYLHTGAKQSIIHRDVKTTNILLDENLVPKVADFGISKKGPLLDKSHVTTNVKGSFGYLDPEYFRTKFLTKKSDVYSFGVVLMEVICGKPALDDDLPTQQKNLALWALSCHKRGTFNEMVDPYLIGKLNMDSLNKILELAWKCLEERRANRPPMGYVLCQLEEALHLELASHVLNGNNNGDSSTYASVGNGFTDDIEDVV* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2384 489 PANTHER OS07G0166700 PROTEIN 2 466 IPR045272 GO:0004714|GO:0006468
Mal5g2384 489 ProSiteProfiles Protein kinase domain profile. 180 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2384 489 Pfam Malectin-like domain 2 89 IPR024788 -
Mal5g2384 489 SUPERFAMILY Protein kinase-like (PK-like) 156 450 IPR011009 -
Mal5g2384 489 Gene3D - 1 91 - -
Mal5g2384 489 Gene3D Transferase(Phosphotransferase) domain 1 256 468 - -
Mal5g2384 489 SMART serkin_6 180 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2384 489 Gene3D Phosphorylase Kinase; domain 1 151 255 - -
Mal5g2384 489 CDD STKc_IRAK 186 452 - -
Mal5g2384 489 ProSitePatterns Protein kinases ATP-binding region signature. 186 208 IPR017441 GO:0005524
Mal5g2384 489 PANTHER OS03G0759600 PROTEIN 2 466 - -
Mal5g2384 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Mal5g2384 489 Pfam Protein tyrosine and serine/threonine kinase 186 446 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2384 Mal-Chr5 64975810 64977279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2384 2 459 Receptor kinase-like Gene Family AT4G39110 45.773 3.10e-138 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mal5g2384 PK_Tyr_Ser-Thr 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2384 - - mtr:MTR_8g467150 669.077