Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2383 ATGTATTTTGTTCGGGTTCATTTCTGTAACATCATTAGCAATTCACTGAACAAAAATATGGTTTTCAATTTATTAATAAATGGAGTGTTTGCTGTTACAAGTCTTGATCTCTCATCCAAAACCAGGGGACTTGATGTCCCATATTACTACGACTTCATCTCCTACTCCTCAAGAGACACTTTCAAAGTGATTGTGAGTGTTGATCCAGATACAATGGCAGACACGTTAAATGCAATCATGAATGGTGTGGAAATATTGAAGATTAGCAACTATGAAGGTAGATTTAATGGGATTTCTTCTTTTCAGGGTTTTAATTCTAACTTATCAGAAAATGAGACAAGTGTTTCAAATTCACCAAATAATAGTTTGCAAAGAAGTGGAAAACTAGGGATTTCGTGGACTATCATTTTAACTGGTTGCAGTGTCTGTGTTTTGGCATTTCTAGCATTTGGTGGACTATCATTTTGTTACTTGAAAAATCGCGGGAGGAAGAAGAATTCAGTAGCTAGTTTTAAGTTTCTGAGACATTTTACTTTGCATGACATGCAAGAAGCAACAAATAATTTTGATGCTGAGCTGCTTATTGGAGCAGGAGGATTTGGAAAGGTGTATAAAGGAAAACTAGAAAATGGGAAAATAGTAGCCATCAAAGTAGCAAATCCTGAATCTAGACAAGGTCTTGGTGAATTCCATAACGAGATTGAGTTGCTGTCTGGTCTTCGTCATTCGAACCTTGTCTCTCTTGTAGGTTGTTGTAATGAAGAGTCAGAACTGATTCTTGTGTACAACTACATGGCAAATGGATCTCTCAGCAGTCATCTATATGGCAGAGACTTTGTTCCTCTGTCTTGGAAGCAACGTCTTGAGATATGTTTAGGGGCTGCAAAGGGACTTTTTTATCTTCACACAGGAGCTAAACAGAGCATAATTCACCGTGATGTGAAGACAACAAACATTCTATTGGATGAAAATCTTGTGCCAAAAGTAGCTGATTTTGGCATATCAAAAAAGGGTCCTCTTCTTGATAAGAGCCATGTTACAACCAATGTAAAGGGTAGCTTCGGCTATCTTGATCCAGAATATTTTAGGACTAAGTTTCTTACTAAGAAATCGGATGTTTACTCGTTTGGGGTGGTGTTGATAGAAACTATATGTGGGAAGCCTGCTCTCGATGATGACCTTCCGACGCAGCAGAAGAATTTGGCATTGTGGGCATTAAGCTGCAACAAAAAGGGCACTTTCATTGAAATGGTGGACCCATATTTGATTGGAAAATTGAATATGGATTCACTAAACAAGGTTTTAGAGTTGGCTTGGAAGTGCTTGGAGGAGCGTCGAGCGAACAGACCACCAATGGGGTACGTATTATGTCAACTAGAAGAGGCTCTCCATCTTGAGTTGGCATCAGATGTTTTGAATAACAATAATAATGGGGATTCTTCTACTTATGCGAGTGAAGGAAATGGATTTACAGATGACATAGAAGATGTTGTATGA 1497 0.3828 MYFVRVHFCNIISNSLNKNMVFNLLINGVFAVTSLDLSSKTRGLDVPYYYDFISYSSRDTFKVIVSVDPDTMADTLNAIMNGVEILKISNYEGRFNGISSFQGFNSNLSENETSVSNSPNNSLQRSGKLGISWTIILTGCSVCVLAFLAFGGLSFCYLKNRGRKKNSVASFKFLRHFTLHDMQEATNNFDAELLIGAGGFGKVYKGKLENGKIVAIKVANPESRQGLGEFHNEIELLSGLRHSNLVSLVGCCNEESELILVYNYMANGSLSSHLYGRDFVPLSWKQRLEICLGAAKGLFYLHTGAKQSIIHRDVKTTNILLDENLVPKVADFGISKKGPLLDKSHVTTNVKGSFGYLDPEYFRTKFLTKKSDVYSFGVVLIETICGKPALDDDLPTQQKNLALWALSCNKKGTFIEMVDPYLIGKLNMDSLNKVLELAWKCLEERRANRPPMGYVLCQLEEALHLELASDVLNNNNNGDSSTYASEGNGFTDDIEDVV* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2383 498 SUPERFAMILY Protein kinase-like (PK-like) 166 459 IPR011009 -
Mal5g2383 498 Gene3D Phosphorylase Kinase; domain 1 155 264 - -
Mal5g2383 498 CDD STKc_IRAK 195 461 - -
Mal5g2383 498 Gene3D Transferase(Phosphotransferase) domain 1 265 482 - -
Mal5g2383 498 SMART serkin_6 189 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2383 498 Pfam Malectin-like domain 2 87 IPR024788 -
Mal5g2383 498 PANTHER OS07G0166700 PROTEIN 2 477 IPR045272 GO:0004714|GO:0006468
Mal5g2383 498 Pfam Protein tyrosine and serine/threonine kinase 194 455 IPR001245 GO:0004672|GO:0006468
Mal5g2383 498 ProSiteProfiles Protein kinase domain profile. 189 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2383 498 Gene3D - 1 89 - -
Mal5g2383 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Mal5g2383 498 ProSitePatterns Protein kinases ATP-binding region signature. 195 217 IPR017441 GO:0005524
Mal5g2383 498 PANTHER OS03G0759600 PROTEIN 2 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2383 Mal-Chr5 64946081 64947577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2383 2 468 Receptor kinase-like Gene Family AT2G21480 46.200 6.28e-141 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mal5g2383 PK_Tyr_Ser-Thr 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2383 - - mtr:MTR_8g467150 683.33