Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2381 ATGACTTTTTCCTCAATAACAGTAATCACTAACAGTTTCGTGCTTCTTGATAACTTCACTTTTGCAAACTATAGTAACTCTCACTTGATGAAGGAGTATGCAATCAGTGTTACATCTTATGAATTGATTGTCACATTCATTTCTCACCGCAATTCAATTGTTTTTGTTAATGCCATTGAAGTTGTCACCATGCCAGATGTTCTCTTTCCTTACAATCTAAATCCATCCACCCCTTTCACAGAATCCACCCTTGAAACAGTGTATCGATTGAATGTGGGAGGCGAAAGTATCAATGCTCAAAATGACACACTTAGTAGGAATTGGGAGAGTGATGAAACTTACTTTCACGCCACCACTACTGCTGTGAATATTTCAACAAACATTTCTGCAATAAAGCATCCTGATTTCTTAGAATTTACAGCACCACCAATGGTTTATGCTACTGCTAAAGCCTTGGGAAATGCCTCAAGGGGTTACCGCTTAAGTTGGGTATTCCGTGTAAGGCCAAACTTTCTTTATTTTGTCCGTGTGCATTTCTGTAACATGATTAGCAACACTACTAACTCTATGGTTTTGGATATATTTATGAATGGAACCATTGAGTTTAGAAGTCTTGACATGTTAAGGGTTTCTGGTGAATTTGCTGAACCGTATTACAAGGACTTTGTGTTCAAATCCACAGGGGAGACACTCACTGTAAGTGTTGGTCCTTCTCAAATATCTACTATAGAAAATGCAACCATGAATGGGATAGAGATAATGAAGTTCATATACAAAGTTGATGATGTTCTAATTCTAACAAAATCTTCAGAAAGAAGCAAGAAATTAAAATTAGTCATTATAATTGGATTTGGCGCCTCTGGTTTAACATTTGTAGCATTTCTTGGACTATCATTTTGTTATCTAAAATCCTGCTGGTTAAAGAAAAATTCAGTAAATGCTTACAATTTTCTGAGACATTTTACTTTGCATGACATGCAACAAGCAACAAATAATTTTGATGCTGAGCTGCTTATTGGAGCAGGAGGATTTGGAAAGGTGTATAAAGGAAAACTAGAAAATGGGAAAGTAGTAGCCATCAAAGTAGCAAATCCTGAATCTAGACAAGGTCTCAGTGAATTCCATAACGAAATTGAGTTGTTGTATGGTCTTCGTCATTCAAACCTTGTCTCTCTTGTAGGTTGTTGTAATGAAGACTCAGAACTGATTCTTGTGTACAACTACATGGCAAATGGATCTCTCAGCAGTCATCTATATGGCAGAGACTTTGTTCCTCTGTCTTGGAAGCAACGTCTTGAGATATGTTTAGGGGCTGCAAAGGGACTTTTTTATCTTCACACAGGAGCTAAACAGAGCATAATTCACCGTGATGTGAAGACAACAAACATTCTATTGGATGAAAATCTTGTGCCAAAAGTAGCTGATTTTGGCATATCAAAAAAGGGTCCTCTTCTTGATAAGAGCCACGTTACAACAAATGTAAAGGGTAGCTTCGGCTATCTTGATCCAGAATATTTTAGGACTAAGTTTCTTACTAAGAAATCGGATGTTTACTCGTTTGGGGTGGTGTTGATGGAAGTTATATGTGGGAAGCCTGCTCTCGATGATGACCTTCCAACGCAGCAGAAGAATTTGGCATTGTGGGCATTAAGCTGCCATAAAATGGGTACTTTCAATGAAATGGTGGACCCATATTTGATTGGAAAATTGAATATGGATTCTCTAAACAAGGTTATAGAGTTGGCTTGGAAGTGCTTGGAGGAGCGTCGGGCAAACAGACCACCAATGGGGTACGTATTATGTCAACTAGAAGAGGCTCTCCATCTTGAGTTGGCATCAGATGTATTGAATGACAATAATAATGGAATGGCCAATTAG 1878 0.3797 MTFSSITVITNSFVLLDNFTFANYSNSHLMKEYAISVTSYELIVTFISHRNSIVFVNAIEVVTMPDVLFPYNLNPSTPFTESTLETVYRLNVGGESINAQNDTLSRNWESDETYFHATTTAVNISTNISAIKHPDFLEFTAPPMVYATAKALGNASRGYRLSWVFRVRPNFLYFVRVHFCNMISNTTNSMVLDIFMNGTIEFRSLDMLRVSGEFAEPYYKDFVFKSTGETLTVSVGPSQISTIENATMNGIEIMKFIYKVDDVLILTKSSERSKKLKLVIIIGFGASGLTFVAFLGLSFCYLKSCWLKKNSVNAYNFLRHFTLHDMQQATNNFDAELLIGAGGFGKVYKGKLENGKVVAIKVANPESRQGLSEFHNEIELLYGLRHSNLVSLVGCCNEDSELILVYNYMANGSLSSHLYGRDFVPLSWKQRLEICLGAAKGLFYLHTGAKQSIIHRDVKTTNILLDENLVPKVADFGISKKGPLLDKSHVTTNVKGSFGYLDPEYFRTKFLTKKSDVYSFGVVLMEVICGKPALDDDLPTQQKNLALWALSCHKMGTFNEMVDPYLIGKLNMDSLNKVIELAWKCLEERRANRPPMGYVLCQLEEALHLELASDVLNDNNNGMAN* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2381 625 Gene3D - 83 257 - -
Mal5g2381 625 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Mal5g2381 625 CDD STKc_IRAK 339 605 - -
Mal5g2381 625 Gene3D Phosphorylase Kinase; domain 1 302 408 - -
Mal5g2381 625 Gene3D Transferase(Phosphotransferase) domain 1 409 621 - -
Mal5g2381 625 PANTHER OS03G0759600 PROTEIN 312 615 - -
Mal5g2381 625 PANTHER OS03G0759600 PROTEIN 6 300 - -
Mal5g2381 625 PANTHER OS07G0166700 PROTEIN 312 615 IPR045272 GO:0004714|GO:0006468
Mal5g2381 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Mal5g2381 625 SMART serkin_6 333 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2381 625 Pfam Protein tyrosine and serine/threonine kinase 338 599 IPR001245 GO:0004672|GO:0006468
Mal5g2381 625 PANTHER OS07G0166700 PROTEIN 6 300 IPR045272 GO:0004714|GO:0006468
Mal5g2381 625 SUPERFAMILY Protein kinase-like (PK-like) 316 602 IPR011009 -
Mal5g2381 625 ProSiteProfiles Protein kinase domain profile. 333 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2381 625 Pfam Malectin-like domain 21 255 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2381 Mal-Chr5 64804858 64806735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2381 4 612 Receptor kinase-like Gene Family AT4G39110 42.511 1.64e-176 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mal5g2381 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2381 - - mtr:MTR_8g467150 1046.96