Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2370 ATGGGAGTTATAGAGAAAGATCCTCTTTCACAATTGAGTTTACCTCCTGGTTTCAGATTCTTCCCCACTGATGAGGAGCTTCTTGTTCAGTATCTATGTCGTAAAGTTGCAGGCCACCATTTTTCTTTGCCAATTATTGCAGAAATTGACTTGTACAAGTTCGATCCTTGGGTTCTTCCAGGCAAGGCAAATTTTGGTGAGAAAGAATGGTATTTCTTCAGTCCAAGGGACAGGAAATATCCAAATGGTTCACGACCAAACAGAGTTGCTGGGTCTGGCTACTGGAAAGCCACAGGAACTGACAAAATCATCACAACTGAAGGTAGAAAAGTTGGTATAAAAAAAGCACTTGTTTTCTATATTGGCAAAGCACCAAAAGGGACAAAAACTAATTGGATTATGCACGAGTATCGTCTTCTTGATGCTTCGCGAAAACACAATCTTGGTAGCTCAAAACTCGATGATTGGGTTTTGTGTCGAATATACAAGAAAAATTCAAGCTCGCAAAAGGAAGTGCCAACATTTTCCGGCAAAGAATGCAGCAATGGTTCCTCGCCTTCATCATCGTCCCAGGTGGACGAAATGTTGGACTCGTTCCTAGAAATTGATGATCAGAGCTTTGCGCTGCCACGTGTGACATCGCTCCGGATGCAACATCAAGAGGAGAAGTTCGGGTTTCAAAACATGGGTGCCGGAATTTTCTCTGATTGGGTTAACCCGATGGATCTTGAATCCATACCGGAATTTGGTTTAGGAAACCAGACGCAAGGGATGCTAAATTACGGTTCTAACGACTATTGTGTCCCTTCCATGCCACCGTTTGGCAACATGGATTTGTCGGCGGAGTCTAGGAACCCCACCGACGAAGAGGTTCAAAGTGGCATGAGGACTAATAATCGGGTTATTGAAAATTCCAATTTATATCAACATAATCCTAATGTGTTTTTATCGGGCTTGGGTGACCCGTTCGGGTTTGGGTATTCGAGTCATTAA 993 0.431 MGVIEKDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPGKANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDASRKHNLGSSKLDDWVLCRIYKKNSSSQKEVPTFSGKECSNGSSPSSSSQVDEMLDSFLEIDDQSFALPRVTSLRMQHQEEKFGFQNMGAGIFSDWVNPMDLESIPEFGLGNQTQGMLNYGSNDYCVPSMPPFGNMDLSAESRNPTDEEVQSGMRTNNRVIENSNLYQHNPNVFLSGLGDPFGFGYSSH* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2370 330 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Mal5g2370 330 MobiDBLite consensus disorder prediction 170 190 - -
Mal5g2370 330 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Mal5g2370 330 PANTHER NAC TRANSCRIPTION FACTOR 56 1 311 - -
Mal5g2370 330 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Mal5g2370 330 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
Mal5g2370 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2370 Mal-Chr5 62866197 62867450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2370 1 295 NAC Transcription Factor Family AT4G27410 61.392 4.71e-118 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal5g2370 NAM 8.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2370 - - gmx:100811301 501.901