Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2329 ATGACCGGCAAAGAAATCCTCCATAAGATGAAGGAAAAAGTTATAGGACCATCTGATCCAGACTCGGGGAAAGGAAAGAGCAAGATGTCAAAGCATGTAACTCATGGCTTTCACTTGGTAAAGGGTAAATCAGCTCATGCCATGGAAGATTACGTGGTTGCTGAATTCAAGCATGTTGATGACAATGAGTTAGGTTTATTTGCAATATTTGATGGTCACGCAGGTCATACTGTACCTGATTACTTGCGTTCTCATTTGTTTGATAATATCATAAAAGAGCCTGATTTCTGGACTGAACCTGCGGATAGTGTGAAGAGAGCATATAAAGAAACTGATTCTACTATTTTAGAGAAATCAGGTGAATTGGGTAAAGGAGGTTCAACTGCAGTTACAGCAATACTGATTAATTGTCAGAAGCTAATAGTGGCCAATATCGGGGATTCTCGGGCTGTCTTATGCGAGTATGGTGTTGCTATACCACTGTCAGTGGATCATGAACCAACAACGGAAAGCGATGATATAAGAAACAGAGGTGGTTTTGTATCTAACTTCCCAGGGGATGTTCCACGGGTTGATGGACAGTTAGCAGTGTCAAGGGCATTTGGCGACAAAAGCCTAAAGATACACATGACCTCAGAACCGCATGTGACAGTGAAGATGATAGACGATGGTGGAGAGTTTGTTATATTAGCCAGTGACGGATTATGGAAGGTCATGTCAAATCAAGAAGCAGTGGATGCTATCAGAGATATCAAAGATGCTCGGTCCGCAGCGAAGCATCTTACTGAAGAAGCGCTTAACAGGAATAGCTCAGATGATATCTCTTGCATTGTTGTGAGGTTTCACTGA 849 0.4205 MTGKEILHKMKEKVIGPSDPDSGKGKSKMSKHVTHGFHLVKGKSAHAMEDYVVAEFKHVDDNELGLFAIFDGHAGHTVPDYLRSHLFDNIIKEPDFWTEPADSVKRAYKETDSTILEKSGELGKGGSTAVTAILINCQKLIVANIGDSRAVLCEYGVAIPLSVDHEPTTESDDIRNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHMTSEPHVTVKMIDDGGEFVILASDGLWKVMSNQEAVDAIRDIKDARSAAKHLTEEALNRNSSDDISCIVVRFH* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2329 282 Coils Coil 244 264 - -
Mal5g2329 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 281 - -
Mal5g2329 282 SMART PP2C_4 30 279 IPR001932 -
Mal5g2329 282 MobiDBLite consensus disorder prediction 8 30 - -
Mal5g2329 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Mal5g2329 282 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
Mal5g2329 282 CDD PP2Cc 35 281 IPR001932 -
Mal5g2329 282 SUPERFAMILY PP2C-like 30 282 IPR036457 -
Mal5g2329 282 Gene3D - 28 282 IPR036457 -
Mal5g2329 282 MobiDBLite consensus disorder prediction 8 28 - -
Mal5g2329 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Mal5g2329 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2329 Mal-Chr5 61726721 61729669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2329 1 282 PP2C-type Phosphatase Gene Family AT3G15260 73.356 4.05e-160 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2329 K17506 - gmx:100787942 483.026