Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2316 ATGGGAGAAACAACACAAGAAACAGCAACAACAAAAACAGCAACAACCTCGTCGGAGAGAATCAGCGGAGGTGGAGGAGGAGGAGGAGAAATCGTGGAAGTTCAAGGAGGTCACATTGTCCGTTCAACAGGACGGAAAGACCGTCACAGCAAAGTATGCACCGCGAAAGGTCCTCGTGACCGCCGCGTACGACTCTCAGCCCATACTGCAATCCAATTCTACGACGTGCAAGACCGTCTCGGCTACGACCGGCCCAGTAAAGCAGTCGATTGGCTCATTAAAAAAGCCAAATCTGCAATCGACGAACTTGCTCAGCTTCCGGCTTGGAACCCCACAGCCACCTGTTCTTCAAGTACACCACAACAAAACGAATTGTTCAACCGCCAATCTCCGGTGGACAACAATCCACTAACCGCTTCAACTAGTCACCGCTCAGCGGCATTAGAGCGAAGAATTCCACAACAATTTTCTTCCCCACAGTTAGACATAGACTATAACAATAGTAGCAGCAGTGGGAAACATGGTTTTCTTCAAGGCTCATTGGACACTGACATTGCGGATACTATTAAGTCCTTCTTTCCGGTTGAAACGCCAACCACGTCGTTTCACAATTATCCACAACCTCCAGATTTGCATTCTCGAACGCCGGCAACCACCCAGCAGCAAGATCTCCGCCTCTCGTTACAATCTTTTCAAGATCCTATTTTGCTTCAGAGCCACCACCACAACAACCAAGTGCTTTTCGCCGGAAACTCCTCCCTTGATTTCGACGGCGGTGGAAGTGGGAACACCACCTTGTGGTCTGATCAGCAGCAACAACATCAAGAGGAACATGATCATGGCAGATTGCATAGAATGATGGCCTGGAATGCTAATGCTGCTCCAGATGGTGGTAACAGTGGCCATGGTGGTGCTGGATTTGTGTTCAGTACCCCGGCTGCGCCGGCTTTCAGCAGTTATGGTCAGCTTTTTACTCAGAGGGGACCCCTTCAGTCCAGTTACAATCCTTCAGTTCGTGCTTGGATAGATCCTTCAATGGCGACGGCGAATATCGTTGATCACCATCATCACTATCTTTCGCCGATGATCCATCAGGCTTCTGTCTCTGGTGGTGGATTCTCCAGCTTTCGTATACCAGCACGAATTCAGGGTGAAGAGGAACATGACGGCGTATCCGATAAACCGTCCTCTGCTTCCTCTGATTCTCGCCGTTGA 1215 0.4971 MGETTQETATTKTATTSSERISGGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAQLPAWNPTATCSSSTPQQNELFNRQSPVDNNPLTASTSHRSAALERRIPQQFSSPQLDIDYNNSSSSGKHGFLQGSLDTDIADTIKSFFPVETPTTSFHNYPQPPDLHSRTPATTQQQDLRLSLQSFQDPILLQSHHHNNQVLFAGNSSLDFDGGGSGNTTLWSDQQQQHQEEHDHGRLHRMMAWNANAAPDGGNSGHGGAGFVFSTPAAPAFSSYGQLFTQRGPLQSSYNPSVRAWIDPSMATANIVDHHHHYLSPMIHQASVSGGGFSSFRIPARIQGEEEHDGVSDKPSSASSDSRR* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2316 404 MobiDBLite consensus disorder prediction 381 404 - -
Mal5g2316 404 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 9 403 - -
Mal5g2316 404 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 403 IPR005333 GO:0003700
Mal5g2316 404 MobiDBLite consensus disorder prediction 1 32 - -
Mal5g2316 404 MobiDBLite consensus disorder prediction 1 22 - -
Mal5g2316 404 MobiDBLite consensus disorder prediction 377 404 - -
Mal5g2316 404 ProSiteProfiles TCP domain profile. 45 103 IPR017887 -
Mal5g2316 404 Pfam TCP family transcription factor 44 126 IPR017887 -
Mal5g2316 404 MobiDBLite consensus disorder prediction 113 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2316 Mal-Chr5 61443195 61444409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2316 25 403 TCP Transcription Factor Family AT1G53230 50.372 1.38e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal5g2316 TCP 1.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2316 - - mtr:MTR_8g463380 630.172