Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2281 ATGGCAGGAAATAAATACAACGGTGATTCTCATAATCATCATCATATACCGGGGCGTGTAGAGAGGCTATTAAGGGATAGAGAGTTAAGGAAAATTGGAATTCAATCAAGTAATGATAAAATGGGTGATGTATATTTAGAGCAGGATCATCACGTGAAAGATGATGTTTCATCAACAATAATAGTAGCTGAGAGGCAACAAGAAAATCATGATGATGTTGTTGGTAATGGGAAATATAAACAGAGACTTTTGGTTGTTGCAAATAGATTACCAGTGTCGGCAAATAGAACAGGTGAAGATTCTTGGTCTTTAGAGATCAGTGCAGGTGGACTCGTTAGTGCTCTCTTAGGTGTGAAGGCGTTTGAGGCAAGGTGGATAGGTTGGGCTGGTGTCAATGTTCCAGATGAGGTTGGACAGAAGGCACTCACTAAAGCATTGGCTGAAAAGAGGTGTATCCCCGTATTTTTGGATGAAGAAATTGTTCATCAATATTACAATGGCTATTGCAACAACATCTTATGGCCACTTTTCCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCTACCACACGTAGTTTTCAATCTCAATTTGTGGCCTATGAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAACCAACACTACGAAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTTATGTTCCTTCCAAAATGCTTAAAGGAACATAACAGTAAAATGAAAGTTGGGTGGTTTCTTCACACCCCTTTTCCTTCTTCTGAAATTCACAGGACACTGCCTTCTCGTTCTGAGCTCCTGCGTTCAGTTCTCGCAGCTGATTTAGTTGGATTTCACACCTATGATTATGCAAGACATTTTGTTAGTGCTTGTACTCGCATCCTTGGACTTGAGGGTACACCTTATGGGGTTGAGTATCAAGGGAAGCTAACTCGAGTTGCCGCATTTCCGATTGGGATAGACTCTGGACGATTTATACGTGCACTAGACCTTCCTCTAGTGCAGAAACATATCCAAGAATTGCAAGAAAGATTCAAAGGAAGAAAGGTAATGTTAGGCGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTTGCCTTTGAGAAGTTTTTGGAAGAAAATGCTTACTGGTGTGATAAAGTAGTTTTGCTTCAAATCGCCGTCCCAACAAGAACAGATGTTCCTGAATATCAAAAGCTTACAAGTCAGGTTCATGAAATTGTCGGTCGCATCAATGGCAGATTTGGATCATTGACTACTGTTCCTATACATCACCTGGATCGCTCGCTTGACTTTCATGAATTATGTGCTTTGTATGCAGTTACCGATGTAGCGCTGGTCACATCTTTAAGAGACGGAATGAATCTTGTCAGTTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGGGCAGCTCAGTCTCTTGGTGCTGGAGCAATTCTTGTCAACCCCTGGAACATTACAGAAGTTGCCAATGCAATTGCAAGGGCTCTAAACATGCAACCTGAAGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTGAAATCCCACACTGCACAAGAATGGGCAGGGACTTTCGTAAGCGAACTAAATGATACTGTTATTGAGGCACAACTGAGGACAAGACAAGTTCCGCCTCGGCTTCCAACTGAGACTGCAATCAGACGTTATTTGGACTCAACTAATAGATTGCTCATTTTGGGATTCAACGGAACATTAACTGAACCGGTTGAGAAAACAGGTGATCAGATTAAGGAAATGGAACTTAAGGTGCATCCAGAATTGAGACAACCCTTGACAGCACTATGCAGTGATCCAAATACCACAGTAGTTGTTCTCAGTGGAAGTGGTAGAAAAGTCCTAGATGACAACTTCAAAGAATACGACATGTGGTTGGCAGCAGAGAATGGGATGTTTTTACAACCTTCAAAGGGTGAATGGATGACAACAATGCCCGAGCATCTGAATATGGAATGGGTCGACAGTGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCGCGGTCACATTTTGATTTTGAAGAGAGGGAAACTTCACTTGTTTGGAATTACAAATATGCAGATGTCGAGTTTGGTAAACTTCAAGCAAGAGACATGCTGCAACATCTCTGGACAGGTCCGATTTCTAATTCGTCAGTTGAGGTTGTTCAAGGGAGCCGATCTGTTGAAGTTAGAGCTGTTGGTGTCACAAAGGGAGCTGCTATTGACCGCATCCTGGGTGAGATTGTTCATAGCAAATCCATGACATCACCAATTGATTATGTTCTTTGTATAGGACATTTTCTTGGGAAGGATGAAGATCTTTATACCTTTTTTGAGCCAGATCTTCCATCTATTGGTGTGAGTCTTCCGCGAAGTAAGGCAACAACAGAAGCAGTTAAGTTTCCAGCTGAGAAGAAACCGGCTTTGAAGATCCCCCCAAGTAGTAGTAAAAATGGATCCAAGTCATCATCTCTAAATAAGGCACAAAAGCCAGTCTCAAATTCTGATCAGAAGAAAACGAATAGTCAAATTTGCAGTTCACCACGACACCCTGCTCCAGAAAATACATCATGGAATGTCCTCGACCTTAATAAAGATAATTACTTCTCATGTTCCGTAGGGAGAAATCGAACAAATGCTCGATATGTGCTTCCCTCACCAGATCATGTTGTTGAGTTTCTGATGGAACTAGCGGATTCATTACCGCACTCTTTACCATTAAGGTAA 2781 0.4146 MAGNKYNGDSHNHHHIPGRVERLLRDRELRKIGIQSSNDKMGDVYLEQDHHVKDDVSSTIIVAERQQENHDDVVGNGKYKQRLLVVANRLPVSANRTGEDSWSLEISAGGLVSALLGVKAFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFVAYEKANQMFADVVNQHYEEGDVVWCHDYHLMFLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSGRFIRALDLPLVQKHIQELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWCDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMQPEEREKRHKHNFLHVKSHTAQEWAGTFVSELNDTVIEAQLRTRQVPPRLPTETAIRRYLDSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPELRQPLTALCSDPNTTVVVLSGSGRKVLDDNFKEYDMWLAAENGMFLQPSKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGKLQARDMLQHLWTGPISNSSVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDLYTFFEPDLPSIGVSLPRSKATTEAVKFPAEKKPALKIPPSSSKNGSKSSSLNKAQKPVSNSDQKKTNSQICSSPRHPAPENTSWNVLDLNKDNYFSCSVGRNRTNARYVLPSPDHVVEFLMELADSLPHSLPLR* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2281 926 Pfam Glycosyltransferase family 20 82 547 IPR001830 GO:0003824|GO:0005992
Mal5g2281 926 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 82 547 IPR012766 GO:0003825|GO:0005992
Mal5g2281 926 MobiDBLite consensus disorder prediction 831 876 - -
Mal5g2281 926 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 62 915 - -
Mal5g2281 926 CDD HAD_TPP 580 813 - -
Mal5g2281 926 MobiDBLite consensus disorder prediction 815 876 - -
Mal5g2281 926 Gene3D Glycogen Phosphorylase B; 329 532 - -
Mal5g2281 926 Gene3D - 669 751 - -
Mal5g2281 926 SUPERFAMILY HAD-like 579 915 IPR036412 -
Mal5g2281 926 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 549 - -
Mal5g2281 926 Pfam Trehalose-phosphatase 585 800 IPR003337 GO:0003824|GO:0005992
Mal5g2281 926 Gene3D - 582 812 IPR023214 -
Mal5g2281 926 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 62 915 IPR001830 GO:0003824|GO:0005992
Mal5g2281 926 CDD GT20_TPS 82 547 IPR001830 GO:0003824|GO:0005992
Mal5g2281 926 Gene3D Glycogen Phosphorylase B; 74 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2281 Mal-Chr5 58410763 58422480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2281 1 918 Trehalose Biosynthesis Gene Families AT1G78580 74.948 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2281 K16055 - gmx:100797320 1553.5