Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2272 ATGAGTTCCGTCGAAATCCTCTCCAGAACTACAATACATGCAGCAAATCGCAATGTTTGTGACTCAACTTATCATACAATCGATCTAACACCATGGGATCTACAATTCCTCCCATTTGGAGTCAACCAAAAGGGGCTTCTTTATCACCACCCTTTCGAATTGGATAGAACAAATCAAATCCAACACCTTAAAGACTCTCTTTCTTCTACCCTTGATTTTTTTAGGCCCTTCACAGGTCGTCTCAAAATAACAAAACACGCAAACAATACTATCTCGTGTTTCATCATGTGCAACAACGAAGGTGCACTCCTTGTTCATGCCGTAGCAAAAAACATTAGTGTCGCGGACATCCTTCGACCAACTTATCATACTACTATTCACCACTCATTCTTTCCACTTAATGGAGTTAAAAACTACGAAGGGACATCAGAACCATTACTTGCAGTCCAAGTAACAGAGTTAGTCGACGGCATCTTCATTGGCTGCACAATCAACCACGTGATTGTTGATGGTACGTCGTTTTGGCATTTTATCAATTCTTGGGCTGAAATCTCAAAAGGTTGTCTTAAAATATCGAAACTTCCAACATTTGAACGTTGGTTTTCAAAAGGTATTGAATGTCCCATTCGATTTCCTTTCACAATAGATCCACAAAATAATTACTATAATAATGATAATGATAAAGAAGAAAAAATCAACCCACCAGAGAGATTATTTCATTTCAAAAAAGAGAATATTACAAAACTAAAATTAAAAGCCAACTTAGAGGCCGGTACAAAAACTTTATCTTCTTTGCAAGCCCTTTTCACTCACATTTGGCGCTCTATTATACGTTGCAAAAAACTTGACCCACAAGCTGAAGTGAAATTTGTGGTGGATATAGGCGTTAGACAAAGGTTGATTCCTCCATTGCAAGAGGATTATTTTGGTAATGCTGTGATAGATTGTGCGGTTAGCACGAAAGTTGGTGACTTGTTGGAAGACGGTGGACTTGGTAAAGGTGCTTGGGAGATGAACAAGATGATTGCCTTTCACTCTAACGAGATGTTGAAAAATCACTATGAGAATTGGTTGATAACACCAAGTTTTTTTACCGTTGGAATGGCCAATAGTAATTCATTGGTGATTGGTAGTTCACCTTGGTTTGATGTTTATGGTAATGATTTTGGATGGGGAAAACCTGTGGGGGTTCGAAGTGGGAGTGCAAATAAAAGAAATGGAAAGATTTATGTGTATGCGGGTGTAGAAGAAGGTAGTATGGACCTCGAAGTATGTCTTCCTTATGAAATTTTGGAGGCAATTGGAAATGATCCTGAGTTTATGGATGTTGTGTCCAACTAA 1341 0.384 MSSVEILSRTTIHAANRNVCDSTYHTIDLTPWDLQFLPFGVNQKGLLYHHPFELDRTNQIQHLKDSLSSTLDFFRPFTGRLKITKHANNTISCFIMCNNEGALLVHAVAKNISVADILRPTYHTTIHHSFFPLNGVKNYEGTSEPLLAVQVTELVDGIFIGCTINHVIVDGTSFWHFINSWAEISKGCLKISKLPTFERWFSKGIECPIRFPFTIDPQNNYYNNDNDKEEKINPPERLFHFKKENITKLKLKANLEAGTKTLSSLQALFTHIWRSIIRCKKLDPQAEVKFVVDIGVRQRLIPPLQEDYFGNAVIDCAVSTKVGDLLEDGGLGKGAWEMNKMIAFHSNEMLKNHYENWLITPSFFTVGMANSNSLVIGSSPWFDVYGNDFGWGKPVGVRSGSANKRNGKIYVYAGVEEGSMDLEVCLPYEILEAIGNDPEFMDVVSN* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2272 446 Pfam Transferase family 3 441 - -
Mal5g2272 446 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 444 - -
Mal5g2272 446 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 444 - -
Mal5g2272 446 Gene3D - 2 206 IPR023213 -
Mal5g2272 446 Gene3D - 215 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2272 Mal-Chr5 57620612 57621952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2272 61 429 Monolignol Biosynthesis Gene Families AT5G48930 26.440 1.15e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2272 - - gmx:100797643 503.056