Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2237 ATGGCTTGTTTACCTTTCATATGTAGTAAGAAAGTGCCTTCTGACATTGTTGAAGGCAATCAGATAAAACTTTACACCTACAAAGAACTAAAAAAGGCCTCTAACAATTTCAGCCTGGCTAATAAAATCAACCAGGGTGGTTTTGGTTCAGTCTATAAGGGAGTGCTAAATGATGGGAAGTTAGCTGCTATAAAAGTTCTTGCAATTCAATTCCGTCTTGAGCCGAAGAAGTTCTTGACCGAGATTAGTGTAATTTCTGAACTCCGGCATGAAAATTTAGTTGAACTATATGGTTGCTGTGTTGAAGGAGATCACCGAATTTTGGTCTACAGTTACCTTGAGAACAATACCCTTGAACAAACCCTCCTAGGTGGAGGTGACAGTAATATCGATTTCGATTGGAAAACACGGTGTAGGATATGTATCGGAGTTGCATGTGGACTGGCCTTTCTTCATGAGCAAGTACAAACAAATAATAATGTTCACAGGGAAATACATGCAAGCAATATTGTCCTAGATAAAGACCTTACACCCAAGATTTCAGATTTTGGTCTTGCAAAACTTATTCGACCAGACATCACTTGTCTCCTCACCTTGGGTCCTATGGCACCAGAGGATGTGTTTATGGGGCCGCTGACATGTAAATCAGATGTTTACAGATTTGGGATTCTCTTGGTGGAGATAATCAGTGGGAGATCTAACCGACGTATTCTAGAACAAACATGGCAACTTTATAAGAGAAAGGAATTGAAAAAGATCGTAGACAAATCAATAGACAAGGGATTGTGTGCCGAGGAAGCTTGTAAATATCTGAAGATTGCCCTTCTTTGCACTCAGAGTACTCCTAAGCTCCGGCCAACCATGTCTTCTGTGCTCAAAATGCTCACCAGAGAAATGGATGTTGATGAAAGTAAGATCACAATACCAGGCTTCATACAATGCTGA 945 0.4032 MACLPFICSKKVPSDIVEGNQIKLYTYKELKKASNNFSLANKINQGGFGSVYKGVLNDGKLAAIKVLAIQFRLEPKKFLTEISVISELRHENLVELYGCCVEGDHRILVYSYLENNTLEQTLLGGGDSNIDFDWKTRCRICIGVACGLAFLHEQVQTNNNVHREIHASNIVLDKDLTPKISDFGLAKLIRPDITCLLTLGPMAPEDVFMGPLTCKSDVYRFGILLVEIISGRSNRRILEQTWQLYKRKELKKIVDKSIDKGLCAEEACKYLKIALLCTQSTPKLRPTMSSVLKMLTREMDVDESKITIPGFIQC* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2237 314 ProSiteProfiles Protein kinase domain profile. 37 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2237 314 Pfam Protein tyrosine and serine/threonine kinase 39 295 IPR001245 GO:0004672|GO:0006468
Mal5g2237 314 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 23 313 - -
Mal5g2237 314 PIRSF ILK 11 305 - -
Mal5g2237 314 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 23 313 - -
Mal5g2237 314 SUPERFAMILY Protein kinase-like (PK-like) 15 295 IPR011009 -
Mal5g2237 314 Gene3D Transferase(Phosphotransferase) domain 1 113 308 - -
Mal5g2237 314 Gene3D Phosphorylase Kinase; domain 1 7 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2237 Mal-Chr5 56646822 56648547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2237 25 312 Receptor kinase-like Gene Family AT1G56120 45.033 1.52e-81 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2237 PK_Tyr_Ser-Thr 3.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2237 - - mtr:MTR_8g461250 474.937