Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2235 ATGAAGCACTTGATCCGCAAACTCTCCCGAGTCATCGACTCAGCCAAAATGCGGCGGAACCACACTCTCCTTCGATCCGACTCAATGCAGCAGACAGAGTTGCTACAGCGGAATGAAGTCCCTGAGGGTCACGTCCCAGTGTACGTGGGAGAGGAGATGGCGCGGTTTGTCGTGAACACAGAGCTACTCAACCATCCGGTTTTCGCCAACCTCTTGAACCAGGCGGCTCAAGAATATGGTTATGAACAAGGTATGCTTCGAATCCCCTGCAAGGTCACCGTGTTTGAGAGAATTCTTGAAGCGCTTCAACTTGGCCGTGACTCGGGTGTGATTCAGGACATTCTCAGTTCCTCATCTTAG 360 0.5194 MKHLIRKLSRVIDSAKMRRNHTLLRSDSMQQTELLQRNEVPEGHVPVYVGEEMARFVVNTELLNHPVFANLLNQAAQEYGYEQGMLRIPCKVTVFERILEALQLGRDSGVIQDILSSSS* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2235 119 Pfam Auxin responsive protein 25 102 IPR003676 GO:0009733
Mal5g2235 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 117 IPR003676 GO:0009733
Mal5g2235 119 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2235 Mal-Chr5 56532251 56532610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2235 6 103 Calmodulin-binding Proteins AT3G43120 35.294 2.63e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2235 K14488 - twl:119985733 135.961