Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2222 ATGATATCAAAATTTTATTCTGACTTTGCGATCAAGTGCGGTGGTCCCCAACTTAGAACTACAGATGGAATTGTGTATCAAACGGACAATGAGACTCTAGGTCCTGCTACATACTTTGTTACAGATACAAATAGATGGGCTGTTAGTAATGTTGGAATATTTACTAATAACGGCAAGCCTCTGTACAAAACTGAAGGTTCGAGTCAGTTCAATGGTACTGTGAACTCAGAGCTTTTAGATCAATTAATCTGGACTTTACAACAAAGAGTTTTGTTACAAACTGCTCGTATCTCTGCATCATCATTAAGATATTATGGTCTGGGGTTAGAAAATGGTTTTTACAACATTACCCTCCAATTTGCGGAAACAACTATTCAGGATTCTCTCACATGGAAAAGCCTCGGGAGACGAGTCTTTGATATTTACATACAGGGGACTTGTGTTTTGAAGGATTTTGACATACAAAGAGAAGCTGGAGGTGTCTCTTACAGTGCTGTTCAAAAGCAATTTAGGTTTGAAGTGAAAGAAAACTATCTAGAGGTTCATCTTTTTTGGGCTGGAAAAGGGACTTGCTGCATACCCAGCCAAGGTAGTTACGGGCCCTTGATTCAAGCCATCAGTGCTACCCCAGATTTCGTACCTATCAACAATAAACCTCCCAGCAGTAAAAGGAATAGAGCGGGTCTAATCATTGGAGTTGTTATGGGTGTTGGAGCTGTTTGCTTTCTAGCAGTTTTTTCCATTTTCTATATCATTCGGAGAAGAAAACTCTATAATGACGACGATGAGCTTTTTGGCATTGATACGATGCCAAACACTTTCAGTTACTATGAATTAAAAAATGCTACAAGTGACTTCAATCGTGACAATAAACTTGGAGAGGGGGGTTTTGGACCTGTTTATAAGGGGATACTTAATGATGGAAGATTTGTAGCTGTGAAACAGTTATCTATAGGATCTCATCAAGGAAAGAGCCAGTTTATAGATGAGATTGCTACTATATCTGCTGTGCAACACCGAAATCTTGTCAAGTTATATGGATGTTGTATTGAAGGGAGTAAAAGACTTCTTGTCTACGAGTATTTAGAAAACAAGAGTCTTGATCAAGCATTGTTTGGAAATGTTTTATTCCTCAATTGGTCAACCCGCTATGATGTTTGTATGGGTGTTGCAAGAGGTTTGACATATTTACACGAGGAGTCACTACTCCGGATTGTGCACCGTGATGTGAAAGCTAGTAATATTCTGCTTGACTCCGAGCTTGTCCCAAAAATATCCGACTTCGGATTGGCCAAATTATACGATGATAAAAAAACGCATATTAGCACCCGTGTTGCTGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGCGGACACCTAACAGAGAAAGCAGATGTTTTTTCCTTCGGTGTTGTGGCTCTGGAGTTAGTTAGTGGGAGGCCAAATTCTGATTCAAGTTTGGAAGAAGAGAAGATGTATCTTCTAGAATGGGCTTGGCAGCTTCATGAAGAGAACTGTATAGATGATCTGATAGATCCTAGACTATCAGAATATAACAAGGAAGAAGTCCATCGCCTTGTGGGAATAGGATTGTTGTGCACTCAGACATCACCAAATTTACGACCATCAATGTCACGTGTAGTGGCAATGCTTTTAGGAGATATTGAAGTGAGCGCCGTAACATCAAGGCCTGGATACTCGATTGACTGGAAATTTGGCGATGTGAGCAGCATCATGACTGACAGTTCAATGAAGGCATTAGATACAAGTAATTACAATTCAACAGCAAGTACCAGCATAGTTGGTGGTGCAGATATTCATTCACCCGATCCTTCTAAACCCATCCTTCATGAGACTCTTAGAGATGATGGTTGGTAA 1884 0.4023 MISKFYSDFAIKCGGPQLRTTDGIVYQTDNETLGPATYFVTDTNRWAVSNVGIFTNNGKPLYKTEGSSQFNGTVNSELLDQLIWTLQQRVLLQTARISASSLRYYGLGLENGFYNITLQFAETTIQDSLTWKSLGRRVFDIYIQGTCVLKDFDIQREAGGVSYSAVQKQFRFEVKENYLEVHLFWAGKGTCCIPSQGSYGPLIQAISATPDFVPINNKPPSSKRNRAGLIIGVVMGVGAVCFLAVFSIFYIIRRRKLYNDDDELFGIDTMPNTFSYYELKNATSDFNRDNKLGEGGFGPVYKGILNDGRFVAVKQLSIGSHQGKSQFIDEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFGNVLFLNWSTRYDVCMGVARGLTYLHEESLLRIVHRDVKASNILLDSELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNSDSSLEEEKMYLLEWAWQLHEENCIDDLIDPRLSEYNKEEVHRLVGIGLLCTQTSPNLRPSMSRVVAMLLGDIEVSAVTSRPGYSIDWKFGDVSSIMTDSSMKALDTSNYNSTASTSIVGGADIHSPDPSKPILHETLRDDGW* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2222 627 PANTHER BNAC03G71060D PROTEIN 78 612 - -
Mal5g2222 627 Gene3D Transferase(Phosphotransferase) domain 1 362 563 - -
Mal5g2222 627 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 78 612 - -
Mal5g2222 627 Pfam Malectin domain 8 206 IPR021720 -
Mal5g2222 627 CDD STKc_IRAK 292 553 - -
Mal5g2222 627 Gene3D Phosphorylase Kinase; domain 1 259 361 - -
Mal5g2222 627 SUPERFAMILY Protein kinase-like (PK-like) 269 566 IPR011009 -
Mal5g2222 627 Pfam Protein tyrosine and serine/threonine kinase 289 553 IPR001245 GO:0004672|GO:0006468
Mal5g2222 627 ProSiteProfiles Protein kinase domain profile. 286 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2222 627 SMART serkin_6 286 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2222 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Mal5g2222 627 Gene3D - 8 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2222 Mal-Chr5 56197565 56201744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2222 5 617 Receptor kinase-like Gene Family AT1G56120 61.951 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2222 PK_Tyr_Ser-Thr 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2222 - - mtr:MTR_8g445800 1129.01