Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2177 ATGTTCCAAACCCTGAGCATGAAAGATGGAGGCTCTGTGGGTTTTGGAGGGCAGCAGAAAGGGAAGATAGTTGGTGCTGGTATGATAGGTAAAAAAAGGTGGATATGGATAAGTTCAATAATAGCAGCTGCTTTACTCATAATATGCCCATTCATCATATTCCTAGTAATGAAGAAACAAAAATATGGGCCTAAAGAGAAGAAAAGTAAAAGAAAGAAAAGTGGGATGCAAGATTTGGCAGCTTCTAATGAGTCCTATGGTATCAAAGATCTTGAAAACGATTTCGAGGGACATGATATTAAAGTTTTTAACTATACATCAATTTTGGAAGCAACAATGGACTTTTCCCCTGAAAACATGTTAGGACAAGGAGGATATGGACCTGTTTATAAGGGAATCTTGCCAACAGGGCAAGCAGTTGCTGTTAAAAGACTTTCAAAAACTTCTGGAGAAGGAATTTTGGAATTCAAAAATGAATTAGCATTGATATGTGAACTTCAACACACAAATCTTGTACAACTACTTGGTTGTTGCATTCATAAAGAAGAAAGGATTTTTATATACGAATTAATGCCAAACAAAAGCTTGGATTTCTATCTATTTGATTGCACAAAAAGGAAGTGCCTAGATTGGAAGAAGCGCTTCAACATTATAGAAGGAATTTCGCAAGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCATAGAGACTTGAAGGCTAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTTCTGATTTTGGCATGGCAAGAATGTTCACCCAACAAGAATCCACAGTAAATACCAATAGGATTGTTGGGACATATGGATACATGTCTCCAGAGTATGCCATGGAAGGAATTTGTTCAACAAAGTCTGATGTCTATAGCTTTGGAGTGTTGTTACTTGAAATTATTTCTGGAAGAAAAAACAATAGCTTCTATGATGTTGATCGCCCACTAAACCTAATAGGACATGCATGGGAGCTATGGAATGATGGTGAGTATCTAAAGCTAATAGATCCAACATTAAATGACACATTTGTTCCTGAAGAAGTGAAAAGGTGCATTCATGTTGCTCTCTTATGTGTAGAACAATATGCAAATGATCGACCTACAATGTCTGATGTTGTATCAGTGTTAACAAACAAATATGATCTCACAGCATTACCAAGAAGACCAGCATTTTATGTTAGAAGAGACATCCTTGAAGGAGAAACAACTTCTAAAGTGCTAGACACTGACACCTATTCTACAAAGCAGTTTCTTCTACCTCATGTGAAGTGGAAGGGAAAATATAAGTAA 1320 0.3621 MFQTLSMKDGGSVGFGGQQKGKIVGAGMIGKKRWIWISSIIAAALLIICPFIIFLVMKKQKYGPKEKKSKRKKSGMQDLAASNESYGIKDLENDFEGHDIKVFNYTSILEATMDFSPENMLGQGGYGPVYKGILPTGQAVAVKRLSKTSGEGILEFKNELALICELQHTNLVQLLGCCIHKEERIFIYELMPNKSLDFYLFDCTKRKCLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESTVNTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIISGRKNNSFYDVDRPLNLIGHAWELWNDGEYLKLIDPTLNDTFVPEEVKRCIHVALLCVEQYANDRPTMSDVVSVLTNKYDLTALPRRPAFYVRRDILEGETTSKVLDTDTYSTKQFLLPHVKWKGKYK* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2177 439 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 25 423 - -
Mal5g2177 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Mal5g2177 439 ProSiteProfiles Protein kinase domain profile. 115 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2177 439 Gene3D Phosphorylase Kinase; domain 1 76 190 - -
Mal5g2177 439 CDD STKc_IRAK 121 388 - -
Mal5g2177 439 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 423 - -
Mal5g2177 439 SMART serkin_6 115 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2177 439 Pfam Protein tyrosine and serine/threonine kinase 118 386 IPR001245 GO:0004672|GO:0006468
Mal5g2177 439 Gene3D Transferase(Phosphotransferase) domain 1 191 395 - -
Mal5g2177 439 SUPERFAMILY Protein kinase-like (PK-like) 100 404 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2177 Mal-Chr5 52922076 52954806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2177 103 404 Receptor kinase-like Gene Family AT3G45860 57.566 7.07e-124 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2177 PK_Tyr_Ser-Thr 5.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2177 - - mtr:MTR_8g052490 586.26