Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2175 ATGCGACGAAACTGGGATTCATTCTTCCGCAAAATTTGTTACAATTGGAACTTTGTTGGAATTATTGCAGGGCCTATTTGCAATAAAAAGCCTATTTCTCATGACGTGCATATATGTGAGGATGGAAGTTTGTTAAAGAGCATCATTGGGATGGGGGAGAAAGAGGAATCCCCTAATGATAATGATGTTGTTTTAGTTGACTTCCTAGCATTTTTTCCTGATCATACATTTATACAAAAGGCTCATCAAGTGAAGTTCAAAGTCAAGGATGGTCTTTTTTGTCCCGCATTGCAACTTGCTGTTAAGACCATGAAGATGGAAGAGAAAGCTTTGTTGTATGTCACTCCAAAGCATGGATTTGGCGAGAAGGGCAAGTACGATGGTGATTTATTAGCTTCAGTTCCACCTAATGCAAGCTTCACCATTTGTCTCACGTTAATTTCTTGGGAGAAGTTTATTCCTTTTTATAAGGAGGTCATCAAGGAAGGAGAAGGAGATGACTGTCCAGAAGAGGGAGCTCTTGTTTGA 528 0.3958 MRRNWDSFFRKICYNWNFVGIIAGPICNKKPISHDVHICEDGSLLKSIIGMGEKEESPNDNDVVLVDFLAFFPDHTFIQKAHQVKFKVKDGLFCPALQLAVKTMKMEEKALLYVTPKHGFGEKGKYDGDLLASVPPNASFTICLTLISWEKFIPFYKEVIKEGEGDDCPEEGALV* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2175 175 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 61 150 IPR001179 GO:0003755
Mal5g2175 175 SUPERFAMILY FKBP-like 35 150 - -
Mal5g2175 175 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP62 37 158 - -
Mal5g2175 175 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 37 158 - -
Mal5g2175 175 Gene3D - 36 150 IPR046357 GO:0003755
Mal5g2175 175 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 56 141 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2175 Mal-Chr5 52719850 52721077 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2175 38 175 Calmodulin-binding Proteins AT3G25230 50.000 1.20e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2175 K09571 - gmx:100794411 133.265