Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2163 ATGGCAGAGGTGAATTTTATAGGAATGTTTTCTCATCCCAACCTTGTGAAGATGTTGGGATTTGGGTGTGAGGATGGTGAGCTACTTCTGGTGCAAGAATTTTTGCACAATGGAAGCTTGGATAGCAACCTATTTGGAAGAGGTTCAAATATTCAACCATTTTCACGAGACAGAAGGCTGAATGGCAAACTCCATAGTGGTATAAACTATAAAGAGAAAGGGGGGGGAGGTACTCTATTTTATGATGTTAGAATGATTTGGGTCAAACTATTTGCTCTCTTTGCTCATTCTTCAAAGTTCAACGGACAAGGCATTCATATATCTGCATCTTCCCTTGGAAGAACCCACACCAATGAGAATGGGTTTATTGTTGGGAACGAACGGACGAGGGTGACAGTTGTTGGGAGCGGCGAGAAGCATTAA 423 0.4208 MAEVNFIGMFSHPNLVKMLGFGCEDGELLLVQEFLHNGSLDSNLFGRGSNIQPFSRDRRLNGKLHSGINYKEKGGGGTLFYDVRMIWVKLFALFAHSSKFNGQGIHISASSLGRTHTNENGFIVGNERTRVTVVGSGEKH* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2163 140 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2163 140 PANTHER OS01G0588500 PROTEIN-RELATED 2 69 - -
Mal5g2163 140 SUPERFAMILY Protein kinase-like (PK-like) 2 58 IPR011009 -
Mal5g2163 140 Pfam Protein tyrosine and serine/threonine kinase 1 47 IPR001245 GO:0004672|GO:0006468
Mal5g2163 140 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 2 69 - -
Mal5g2163 140 Gene3D Transferase(Phosphotransferase) domain 1 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2163 Mal-Chr5 52104977 52106076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2163 1 103 Receptor kinase-like Gene Family AT5G60320 34.615 7.98e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal5g2163 PK_Tyr_Ser-Thr 1.6e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2163 - - gmx:100813304 89.3521