Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2157 ATGGTGAATCTATTATCTTGTTGTCTAGTATTTCTTTTTTCGATCCCACTTCATTGTTTCGTGGCTTCCTTAGCTGCAAATACAAAAAATATTACGACAGATAAATCTGCTCTTCTAGCATTCAAATCCCTTATTACTTCAGATCCCAATGATATGTTGGCTAATAATTGGTCAACTTCCTCTTCTCCATGCAGTTGGATTGGTGTTATTTGTGATGAACGACACAATAGAGTCCAAAGTTTGATTCTCACAAACATGGGTCTTAGAGGTACTGTTTCTCCAAACCTGGGGAATCTGTCATTCCTTGTAAAACTTAATATCCGCAACAATAGCTTCGGTGGTCAGTTTCCTAAAGAGATATGTTGGTTGCGACGATTGAAGGTTCTTGATTTCAGCTATAATGAGTTTGTTGGGGGAATTCCTGCATCGTTGGGAGACTTATCACAACTTCAATATTTGTATCTTGGCGATAACAATTTTAGTAGTTTTATCCCCCAATCTATTGGTAACCTTCGCCGGTTGAAACTTTTGGATACTACTCACAATAGGCTGTCTGGACCCGTACCTCAAACAATTATGAACCTCTCTTCACTTGAATATATTGGTTTATCTTCTTACTACTTTTCAGGAGAAATTCCAAAAGGGGTATTGGGTGATCTTACACAGTTGAGAACAATGGCCCTTGAAAATAATCAGCTTTCAGGCAACATCTCGTCGATATTAAAATTCAACAACTCATTGTTGAAAGATTTGTATCTTGGTTATAATAATCTTTCTGGCAATCTTCCGTCAAATATTTGTCACGGGCTTCCAAATCTTAGAATTCTTATTCTTTATCATAATGATCTTTCTGGTGACATGCCTTCTTTCAACAAGTTAATGACCACGAATCTGCAGTCTACCAATAATCATGAATATCATCATAACACTTCTTATTCATTTTCAGGTCCGATACCCGAGGAGATTGGCTATCTTGATAAACTTGAGACTCTAGTAATGATAAAAAATAGCTTTAGTGGATGTATTCCTTCCAAACTCCTCAACATGTCATCACTGATAGACTTGGAGCTAGATCAAAACTACCTCTCAGGCGTAATTCCATCAAATATGGGATATAGTCTTCCTAACCTGCAATATCTACTCTTGAATGGAAACAATTTTGTTGGACATATTCCAAATAGTATCTTCAACGCTTCTAATCTCATTGAATTTCAATTGGAAAGTAATGCATTTAGTGGAAGTTTTGATTTTGGTCGGATTCACAACACTAACGCTTTTGGAAATTTAAGGTTCCTTGAAATGCTTTTCATATATTACAACAATTTGACAATAATCAATTCTCTTGAATTCTTTACTTCCTTGAGAAATTGTAGATATTTGAAATATCTAGACTTATCAGGAATTCATATACAATCCAATCTTCCTAAGTCAATTGGAAACATAACTTTAGAATACTTTACAGCAGATTCATGTGGAATTGTTGGTAATATTCCTCAAGAAATTGGAAACATGAGCAAGTTGTTGTCGTTTTCTCTAAATGAGAATAATATAAATGGACCAACACCTGAGTTTTGTGAAATTCAAAGTTTGAGTGAGTTGTATCTTGAAAACAATATGCTTTCTGGAGCTTTGCCAACATGTTTGGGAAATATGACTTCTCTTAGAAAGATAAACTTAGGATATAACAATTTGAATTCTATGATACCTTCCTCTTTTTGGAGTCTCACAGATATCTTAGAGGTAAATTTGACCTCTAATGCTTTCATTGGTAATCTTCCAAATGAGATTAGGAATTTGAGAGAAATTGTACAATTAGAACTATCAAAAAATAATATTTCAAGCAAGATTCCTACAACCATCAGTTCCTTAAAAAATTTGCAGAATCTCTCCTTAGCTCATAACAAAATATATGGACCAATTCCCACCTTACTCGGTGAAATGGTAAGCTTGATCTCCTTGGACTTGTCCCAAAATATGTTAACTGGTGTTATTCCGAAATCCTTAGAATCACTTTTGTATCTACAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCCAATGGTGGACTTTTCAAAAATTTCATGACTCAATCTTTTATGCATAATGGAGCACTTTGCGGAAATCCTCGCCTAGAAGTACCTCCATGTCGTAAACAAGAAAAGAAAAGTTCATTGGAAAAGTTGTTATTACTCAAATGCATAATTCCCATAGTTGTGTTAACCAGTATATTTGTTGCATGCATAATACTTTTAATAGTTAATAGAAGGAAAAAGGTTGAAAATGCTCTTGAAACGAGTTTATCAACTTTAGGAGCTCCAAGAAGAACTTCTTATTATGAACTTGTGCAAGCAACAAATGGATTCAATGAGAGTAATTTTCTTGGAAGTGGGGGCTTTGGCTCTGTGTATAAGGGGAAGCTTTCTGATGGTGAGATGATTGCAGTTAAAGTAATTGATTTGCATTCAGAGGAAAAATCAAGGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATCTGGTTAAGATTATCAGCAGTTGTTCAAATTTGGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTGGACAAATGGATACATTCAGATAACCATTGTTTAAATTTCTTGCAAAGGATAAATATAATCATTTTGCATAGGATAAATATTGGCAACTTCTTAATGTTTTTGGAGTATGGATCTAAAGGAATGGTTTCTGTTAAAGGAGATGTGTACAGCTATGGAATTATGTTAATGGAAATTTTCACAAGAAGAAAGCCAACAGATGATATGTTTGTAGCAGAACTAAGTTTAAAGACATGGATTAGTGGATCATTGCCTAATTCGATTATGAATGTCTTGGATTCTAATTTAGTCCAACAAAATGGGGAACATACTGATGTCATTTTGACATACATGTCATATATTTTTGGTTTAGCCTTAAATTGTTGCGAAGATTCACCCCAAGCAAGAATAAGTATGGCAGATGTTATCGCGTCGCTTATCAAAATTAGGACTGATCTTGGCAGAAACGCGGTCTAG 3069 0.3464 MVNLLSCCLVFLFSIPLHCFVASLAANTKNITTDKSALLAFKSLITSDPNDMLANNWSTSSSPCSWIGVICDERHNRVQSLILTNMGLRGTVSPNLGNLSFLVKLNIRNNSFGGQFPKEICWLRRLKVLDFSYNEFVGGIPASLGDLSQLQYLYLGDNNFSSFIPQSIGNLRRLKLLDTTHNRLSGPVPQTIMNLSSLEYIGLSSYYFSGEIPKGVLGDLTQLRTMALENNQLSGNISSILKFNNSLLKDLYLGYNNLSGNLPSNICHGLPNLRILILYHNDLSGDMPSFNKLMTTNLQSTNNHEYHHNTSYSFSGPIPEEIGYLDKLETLVMIKNSFSGCIPSKLLNMSSLIDLELDQNYLSGVIPSNMGYSLPNLQYLLLNGNNFVGHIPNSIFNASNLIEFQLESNAFSGSFDFGRIHNTNAFGNLRFLEMLFIYYNNLTIINSLEFFTSLRNCRYLKYLDLSGIHIQSNLPKSIGNITLEYFTADSCGIVGNIPQEIGNMSKLLSFSLNENNINGPTPEFCEIQSLSELYLENNMLSGALPTCLGNMTSLRKINLGYNNLNSMIPSSFWSLTDILEVNLTSNAFIGNLPNEIRNLREIVQLELSKNNISSKIPTTISSLKNLQNLSLAHNKIYGPIPTLLGEMVSLISLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPNGGLFKNFMTQSFMHNGALCGNPRLEVPPCRKQEKKSSLEKLLLLKCIIPIVVLTSIFVACIILLIVNRRKKVENALETSLSTLGAPRRTSYYELVQATNGFNESNFLGSGGFGSVYKGKLSDGEMIAVKVIDLHSEEKSRSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWIHSDNHCLNFLQRINIIILHRINIGNFLMFLEYGSKGMVSVKGDVYSYGIMLMEIFTRRKPTDDMFVAELSLKTWISGSLPNSIMNVLDSNLVQQNGEHTDVILTYMSYIFGLALNCCEDSPQARISMADVIASLIKIRTDLGRNAV* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2157 1022 SUPERFAMILY L domain-like 33 291 - -
Mal5g2157 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 149 - -
Mal5g2157 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 904 1015 - -
Mal5g2157 1022 Pfam Protein kinase domain 792 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2157 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 312 522 - -
Mal5g2157 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 9 149 - -
Mal5g2157 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 904 1015 - -
Mal5g2157 1022 ProSiteProfiles Protein kinase domain profile. 791 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2157 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 473 893 - -
Mal5g2157 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 243 289 - -
Mal5g2157 1022 SUPERFAMILY Protein kinase-like (PK-like) 768 1014 IPR011009 -
Mal5g2157 1022 Gene3D Ribonuclease Inhibitor 293 373 IPR032675 -
Mal5g2157 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 473 893 - -
Mal5g2157 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 243 289 - -
Mal5g2157 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 138 239 - -
Mal5g2157 1022 Pfam Leucine rich repeat 529 587 IPR001611 GO:0005515
Mal5g2157 1022 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Mal5g2157 1022 Gene3D Ribonuclease Inhibitor 374 728 IPR032675 -
Mal5g2157 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 312 522 - -
Mal5g2157 1022 ProSitePatterns Protein kinases ATP-binding region signature. 797 819 IPR017441 GO:0005524
Mal5g2157 1022 SUPERFAMILY RNI-like 313 691 - -
Mal5g2157 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 138 239 - -
Mal5g2157 1022 Gene3D Phosphorylase Kinase; domain 1 774 866 - -
Mal5g2157 1022 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Mal5g2157 1022 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Mal5g2157 1022 Gene3D Transferase(Phosphotransferase) domain 1 901 1015 - -
Mal5g2157 1022 SMART LRR_typ_2 429 452 IPR003591 -
Mal5g2157 1022 SMART LRR_typ_2 374 398 IPR003591 -
Mal5g2157 1022 SMART LRR_typ_2 270 292 IPR003591 -
Mal5g2157 1022 SMART LRR_typ_2 527 550 IPR003591 -
Mal5g2157 1022 SMART LRR_typ_2 647 670 IPR003591 -
Mal5g2157 1022 SMART LRR_typ_2 599 623 IPR003591 -
Mal5g2157 1022 SMART LRR_typ_2 551 574 IPR003591 -
Mal5g2157 1022 SMART LRR_typ_2 147 171 IPR003591 -
Mal5g2157 1022 Gene3D Ribonuclease Inhibitor 190 292 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2157 Mal-Chr5 51395689 51501850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2157 546 690 Receptor kinase-like Gene Family AT3G47570 31.034 4.77e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal5g2157 Pkinase 5.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2157 - K13420 mtr:MTR_8g465340 1091.64