Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2138 ATGGAACAAAGCAATAATTTTGATTTATCCAACCTTATGTGCTATGAAAACATTTTGTCATGCTTTAACAATTTTGAAAGTAATGTTGATGATGGGTCTACTCTTTCGTTTAACAATCCTTGTTTGAGTAATAACAACATTGAATCAGAAAATTTGTTTAGTGTTTCTGTACGTAGTGATGAAACCGTTTTATATTTGGTTAAGAGAGAGAGTGAGCATTTGCCTCATGATGATTATCTTGAGAGGCTTCGTGGTGAGGACATCAACTTGAAATTTAGGGACTTGAACTTGAACATGAACTTGAACTTAATTTGTATTAGGAGCGAGGCTATTGAGTGGATGTGGAAGACTGCTGCATATTATGGTTTTGGACCCTGTATTTTTTCTCTTGCTGTGAACTATCTAGATCGTTTCCTATCTGTGTACAAATTTGAAGGGGGCCAGGTTTGGAGTGTGCAATTGTTGGCTTTAGCATGTTTGTCAATTGCTGCTAAAATGGAGGAGAGTCATATATTGCCTAAATCTATAGACTTGAAGTTAGGAGAATCAATGATTGCATTTGAAACTAAAGGCATTAAAAAAATGGAGCTATTGGTATTAGACCACCTGAATTGGAAAATGCAATCTTCAACTCCATGTTCCTTTTTGGATTACTTCCTTAGTAAGATTACATCTGAGCAGCAGTATCAATGGTCATCCATGTTGAATTCAATAGATCGCATTCTTGAAATGCCTAAATATATTGATTTCTTGGAATTCAGACCTTCTGAAATTGCTGCAGCAACTGCAATTTTGGTTTCGAAGGAATTGGAAACAAATGGGATTGATGATGTCTTCGCTCGTTTTGCTGTTGTGGAGAAGGACAAAATTTTGAAGTGTCTTGAACTAATGAAAAATTTGGGTTGGATGAAAGTTTCTTCTGGTCTAAGCAGCATCAACTTTGGAAAATATGTACCTGAAAGCCCTGTTAGAGTGTCGGATTCTGCATGGCTGGGCTCTACATGTGATGAAAGTACAACAAATGGATTATATCCAAATTCTTCTCCTGAAAGTTCACATGCAAGCAAGAGGCACAAATCCTTCCATGATGATGGAGCTTTCTAG 1104 0.3668 MEQSNNFDLSNLMCYENILSCFNNFESNVDDGSTLSFNNPCLSNNNIESENLFSVSVRSDETVLYLVKRESEHLPHDDYLERLRGEDINLKFRDLNLNMNLNLICIRSEAIEWMWKTAAYYGFGPCIFSLAVNYLDRFLSVYKFEGGQVWSVQLLALACLSIAAKMEESHILPKSIDLKLGESMIAFETKGIKKMELLVLDHLNWKMQSSTPCSFLDYFLSKITSEQQYQWSSMLNSIDRILEMPKYIDFLEFRPSEIAAATAILVSKELETNGIDDVFARFAVVEKDKILKCLELMKNLGWMKVSSGLSSINFGKYVPESPVRVSDSAWLGSTCDESTTNGLYPNSSPESSHASKRHKSFHDDGAF* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2138 367 SMART cyclin_7 112 201 IPR013763 -
Mal5g2138 367 SMART Cyclin_C_2 210 333 IPR004367 -
Mal5g2138 367 MobiDBLite consensus disorder prediction 341 367 - -
Mal5g2138 367 CDD CYCLIN 107 200 IPR013763 -
Mal5g2138 367 MobiDBLite consensus disorder prediction 352 367 - -
Mal5g2138 367 SUPERFAMILY Cyclin-like 50 207 IPR036915 -
Mal5g2138 367 PANTHER CYCLIN-D4-1-LIKE 56 359 - -
Mal5g2138 367 ProSitePatterns Cyclins signature. 107 138 IPR006671 -
Mal5g2138 367 Gene3D - 209 295 - -
Mal5g2138 367 Pfam Cyclin, C-terminal domain 211 301 IPR004367 -
Mal5g2138 367 PANTHER CYCLINS 56 359 IPR039361 -
Mal5g2138 367 Gene3D - 106 208 - -
Mal5g2138 367 Pfam Cyclin, N-terminal domain 101 207 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2138 Mal-Chr5 50580256 50582761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2138 13 277 Core Cell Cycle Gene Families AT5G65420 41.353 6.34e-63 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2138 K18810 - gmx:100800570 311.227