Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2136 ATGAAAGAAGAAGAAGAAGGAACCTTTTGCTCAGAGAGTAAAGAAAACGATGTATTCATCAGCTTTAGAGGAGAGGACACACGCAGCAACTTTACGAGCCATCTTCATGCAGCTTTATCCCGAGCCAGAGTTAAAACCTTCATCGACTACAACCTTAAAAAAGGTGACAGTATCTCAGAAACTCTCATGAAAGCAATACAAGATTCCTATGTATCTGTTGTTGTTTTCTCAGAAAACTTTGCATCATCCACGTGGTGCTTAGACGAGCTTACACACATAATCAAATGCTTAAAACAGAACCAGATCGTTGTTGTACCTGTGTTCTATAACGTAGATCCTTCCCACGTGCGGAAGCAGAGTGGTAGTTACATGATTGCTTTTGAGAACCACGTGCTTAATCTCAACCACTTTAACAAGGTCAATGATTGGCGTGAAGCTTTAACTCAAGCTACTAGTTTGGCTGGATGGGACTCTCGTAAATACATGCTTGAATCAGAACTTGTGGAAGACATTGTCCAAGACGTTTTGCAAAAACTTCAATGTAAATATCCAAAGGAATCGAAGGGTCTTGTTGGAATTGACAAACACTATGCACATCTTGAATCACTTCTGAGAATAGGGTCAAAAGAAGTTGGAATGATTGGAATATGGGGGATGGGAGGCATTGGTAAGACAACCATTGCTGCAGCTATATTTGACCACTTCTCTTCTCAATTTGAAGGATGTTGTTTCTTGGAAAATATAGGAGATGAATCAGATCGGCATGGATTGAATTTTTTGCATAACAAACTTCTAACAATGTTACTGGAAGAAGAAGAAAATCTCCATATCGATACAGTCCGATTAGGTAGCAATTTTAGTAACAGCAGGCTTAGTCATAAAAAAGTTCTGATTGTGCTTGATGATGTAAGAACTCCTGAGCAACTAGATTTTCTAGTTGGAGCGCGTACCTGCTTGGGACCGGGGAGTAGAGTCATTGTTACAGCTAGAGATAAGCACGCGCTAATTGAACGAGCTCATGAAATATATGAGGTGAAGCCATTAAACTTTCATGAATCTCTTCAGCTTTTCAGTTTAAGTGCTTTCAAGAAAGTGCACCCGGACATTGGCTATCAGCAGCTATCCGAAAGTGTGGTTAATTATGCAGGTGGCATTCCATTGGCTTTGAAAGTTTTAGGCTCATTATTTTGTAATAAGAGTACAGAAATATGGCAAAGTACAATGACTAAACTAAAGAAAATTCCCTGTAGGGAAATTCAGAATATCTTAAAACTGAGCTATGATGGGTTAGATGATACAGAGAAAGAAATATTTCTAGACATTGCCTGCTTTCTGAATGGAAAGGATAGACAACATGTGACAAGACTTCTAGATGCCTGTGGCTTCTATGCAGTTCCTGGTTTAGAAACCCTTTTGGAAAAAGCTCTAATTACAATTTCAAATAACAATCAAGTACAAATGCATGCCTTGATACAAGAAATGGGCCGGGAAATTGTTCGTCAAGAATCTACTAAAGACCCTGGTAGACGCAGTCGATTGTATGGTCAGGAAGAAGTTTACGATGTTCTGAAAAATAATATGGGCACTAGTGCAATTGAAGGAATTAGCCTAGATGTGTCCCAAATCAGAGATATGAATGTGAGCTCTGACATTTTTGTGAAGATGATAAACCTAAGATTTCTCAAATTCTACTCTCGCTCGGGTGAGAGATGTAATGTTTCCTTTCCTGCTGGTCTTGAGTCATTGTCTAATAAGTTAAGGTACCTCCATTGGAGTTCATATCCTTTGAAGTCTCTACCATCAGCATTTTCTCCTGAGAAACTTGTTGAGCTTTACATGCCAAACAGCCGTGTTCAAAGATTATGGGACGGAGTGCAGGATCTTACTAATTTAAAGAAAATGGACCTCAGCTGTTGTGAGAACTTGATACAGCTTCCAGATTTCTCCATGGCATCAAACCTCGAAACCATTAACCTCTCTAGATGTGTAAGGCTGCGTCATGTTCACGCATCTATTTTATCTCTCCAAAAACTTGTCAATTTAAACCTGGTTTGGTGCAAAAGGCTAAAGAGTCTTCTAAGCAATGCCCCTTTGAACTCTCTGAGAATTCTCGAGCTCTACGGCTGCTCAAGTCTCAAGGAATTTTCGGTGACATCTAAGGAAATGACATACTTGGATTTAAGATGTACTGCTATCAATGAATTGCCGCCATCATTCAAGTACCTAGGTAGTCTTATGAACTTGGAGCTGAGTAGCTGTGTACGCCTTAGATATCTTCCAAATGAGTTCTCAAGCCTGAAATCTCTTGGCCGTCTGGTACTTTCTGATTGCACACTACTTGACACATCGAATCTGCATCTTCTATTCGATGGCCTGCGTTCTTTAGGATACCTTTGTCTTGACAACTGTTTTAACCTAACTGAACTCCCTCACAACATTAGTCTTTTATCATCATTGTATTATTTATCACTCAGTGGAAGCAATGTAAAGAACATTCCTAAAAGCATCAAGCATCTTTCACAGCTAGAATCCCTTGACTTGTGCAAATGCATGAGCATTCAGTCTCTACCAGAACTCCCACCATCCATTGAAGTGTTGGATGTCACCAACTGCACGTCCTTGGAGACCGTCTTCACATGTCCTGTTATCGATGAACTACTACAAGAGCGCAAGGTATTCATTTCCTTAAAAAATTGTGTGAAATTGAACGAATACTCCCTCAATGGTATTATGTTAGATGCGCAAGTGAGACTAAAAGAGGCGGCATATGTTGATGTATCAGCAAAAATAGAAGGGAGTGAGAGTGATCCTTGTCACTTTTTTAAATCGGAGGTGACATTGTCGTATCATCATCCACCAACTGTAATTTACCCCGGAAGTAAAGTTCCTGACTGGTTCCACTATCGGTCAACTAAAGCATCGATAACCATCGAACTTTCACTTTCACATTCTCCACAATCCAACATATTTGGTTTCATTTTCTGCCTCATTCTTCCTCCATCATTATCAAATGAAAAGAATTGCAATTGGAAAATTGGATGTGAATGCTACCTGGAAGGTGGTGAAAACATCAGAAACACAAGTATGTGCTCTTTTGCTACAGGATTGGTTTCAGATCATGTGTACCTATGGTATGATGAAAATTTTTGTTTTGACATATTTAACACAACTGGCAAAAGTAGAACCAATGATGACTACAGTGCTTATAAACCAAAGCTTACATTTCAATTCTTTGTTGAAACCGAAGATAAGTTGAATGTGGCGATTAAAGAGTGTGGGATCTGCCAAATATATGGTTCAGAATATCTTAGTTTTGTTGAACAATTGGGGTTTGAATTGGAGTTGGGAAATCAAGCAAAAAGGTGTAGGGATATTTATGAGTTAGAATCAAGTGAAAAAGAAACTCAAGTTGAAGGCTGTTTTGAGCATGAAGATGAACAAAAAGATACATTTCATCAAAGAAAGAAACAGAAGCTAGAAGAGGCAGACATATCATCACCATCACAACAATGGTAG 3516 0.3905 MKEEEEGTFCSESKENDVFISFRGEDTRSNFTSHLHAALSRARVKTFIDYNLKKGDSISETLMKAIQDSYVSVVVFSENFASSTWCLDELTHIIKCLKQNQIVVVPVFYNVDPSHVRKQSGSYMIAFENHVLNLNHFNKVNDWREALTQATSLAGWDSRKYMLESELVEDIVQDVLQKLQCKYPKESKGLVGIDKHYAHLESLLRIGSKEVGMIGIWGMGGIGKTTIAAAIFDHFSSQFEGCCFLENIGDESDRHGLNFLHNKLLTMLLEEEENLHIDTVRLGSNFSNSRLSHKKVLIVLDDVRTPEQLDFLVGARTCLGPGSRVIVTARDKHALIERAHEIYEVKPLNFHESLQLFSLSAFKKVHPDIGYQQLSESVVNYAGGIPLALKVLGSLFCNKSTEIWQSTMTKLKKIPCREIQNILKLSYDGLDDTEKEIFLDIACFLNGKDRQHVTRLLDACGFYAVPGLETLLEKALITISNNNQVQMHALIQEMGREIVRQESTKDPGRRSRLYGQEEVYDVLKNNMGTSAIEGISLDVSQIRDMNVSSDIFVKMINLRFLKFYSRSGERCNVSFPAGLESLSNKLRYLHWSSYPLKSLPSAFSPEKLVELYMPNSRVQRLWDGVQDLTNLKKMDLSCCENLIQLPDFSMASNLETINLSRCVRLRHVHASILSLQKLVNLNLVWCKRLKSLLSNAPLNSLRILELYGCSSLKEFSVTSKEMTYLDLRCTAINELPPSFKYLGSLMNLELSSCVRLRYLPNEFSSLKSLGRLVLSDCTLLDTSNLHLLFDGLRSLGYLCLDNCFNLTELPHNISLLSSLYYLSLSGSNVKNIPKSIKHLSQLESLDLCKCMSIQSLPELPPSIEVLDVTNCTSLETVFTCPVIDELLQERKVFISLKNCVKLNEYSLNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCHFFKSEVTLSYHHPPTVIYPGSKVPDWFHYRSTKASITIELSLSHSPQSNIFGFIFCLILPPSLSNEKNCNWKIGCECYLEGGENIRNTSMCSFATGLVSDHVYLWYDENFCFDIFNTTGKSRTNDDYSAYKPKLTFQFFVETEDKLNVAIKECGICQIYGSEYLSFVEQLGFELELGNQAKRCRDIYELESSEKETQVEGCFEHEDEQKDTFHQRKKQKLEEADISSPSQQW* 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2136 1171 Gene3D - 176 342 IPR027417 -
Mal5g2136 1171 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 156 IPR035897 -
Mal5g2136 1171 Pfam NB-ARC domain 202 428 IPR002182 GO:0043531
Mal5g2136 1171 PRINTS Disease resistance protein signature 290 304 - -
Mal5g2136 1171 PRINTS Disease resistance protein signature 213 228 - -
Mal5g2136 1171 PRINTS Disease resistance protein signature 626 642 - -
Mal5g2136 1171 PRINTS Disease resistance protein signature 382 396 - -
Mal5g2136 1171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Mal5g2136 1171 Gene3D - 13 175 IPR035897 -
Mal5g2136 1171 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 1156 - -
Mal5g2136 1171 ProSiteProfiles TIR domain profile. 14 179 IPR000157 GO:0007165
Mal5g2136 1171 MobiDBLite consensus disorder prediction 1131 1171 - -
Mal5g2136 1171 Pfam TIR domain 17 190 IPR000157 GO:0007165
Mal5g2136 1171 Pfam Leucine Rich Repeat 607 626 IPR011713 -
Mal5g2136 1171 MobiDBLite consensus disorder prediction 1131 1162 - -
Mal5g2136 1171 Pfam C-JID domain 957 1101 IPR045344 -
Mal5g2136 1171 Gene3D Ribonuclease Inhibitor 481 719 IPR032675 -
Mal5g2136 1171 Gene3D Ribonuclease Inhibitor 720 912 IPR032675 -
Mal5g2136 1171 SUPERFAMILY L domain-like 487 883 - -
Mal5g2136 1171 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1156 IPR044974 GO:0006952
Mal5g2136 1171 Gene3D - 348 431 IPR042197 -
Mal5g2136 1171 SMART till_3 15 153 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2136 Mal-Chr5 50545716 50550433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2136 11 845 WRKY Transcription Factor Family AT4G12020 36.364 1.44e-131 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2136 - - mtr:MTR_4g043630 2139.77