Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2135 ATGAACAATGAAGAGAAGATAGAAGCTGCTTGTAAGAAGAAAAATGATGGGGATGCATTGTTTTGCGCTGGGAAATATGCAAGAGCTTATGAAAGATTTATGAAGGCTCTAGATTTTGTAATGAAAGTTGGCGACCGCGTTAGTGATGAGGAGATGAAAATTGTTAGGAGCTTGTGGGATGACTGCTTTGTGGGCTTTTCGAAGTGCAAGAAAGAATTGGAAGGTTATGATCAGGACGAGGAATTTCTGGAGATGCAGATGCAGGAGCTTGAGGCTACAAATGATTGGAACAGGCACGTGGTGTGGCAGGAGTACGGGTATCTAAGGATTATGTAG 336 0.4256 MNNEEKIEAACKKKNDGDALFCAGKYARAYERFMKALDFVMKVGDRVSDEEMKIVRSLWDDCFVGFSKCKKELEGYDQDEEFLEMQMQELEATNDWNRHVVWQEYGYLRIM* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2135 111 Coils Coil 73 93 - -
Mal5g2135 111 Gene3D Tetratricopeptide repeat domain 1 94 IPR011990 GO:0005515
Mal5g2135 111 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 94 - -
Mal5g2135 111 PANTHER PEPTIDYLPROLYL ISOMERASE 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2135 Mal-Chr5 50477805 50479172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2135 1 94 Calmodulin-binding Proteins AT3G25230 42.553 8.29e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2135 K09571 - egt:105954432 67.3958