Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2132 ATGAAAGAAGAAGAAGAAGGAACCTTTTGCTCAGAGAGTAAAGAAAACGATGTATTCATCAGCTTTAGAGGAGAGGACACACGCAGCAACTTTACGAGCCATCTTCATGCAGCTTTATCCCGAGCCAGAGTTAAAACCTTCATCGACTACAACCTTAAAAAAGGTGACAGTATCTCAGAAACTCTCATGAAAGCAATACAAGATTCCTATGTATCTGTTGTTGTTTTCTCAGAAAACTTTGCATCATCCACGTGGTGCTTAGACGAGCTTACACACATAATCAAATGCTTAAAACAGAACCAGATCGTTGTTGTACCTGTGTTCTATAACGTAGATCCTTCCCACGTGCGGAAGCAGAGTGGTAGTTACATGATTGCTTTTGAGAACCACGTGCTTAATCTCAACCACTTTAACAAGGTCAATGATTGGCGTGAAGCTTTAACTCAAGCTACTAGTTTGGCTGGATGGGACTCTCGTAAATACATGCTTGAATCAGAACTTGTGGAAGACATTGTCCAAGACGTTTTGCAAAAACTTCAATGTAAATATCCAAAGGAATCGAAGGGTCTTGTTGGAATTGACAAACACTATGCACATCTTGAATCACTTCTGAGAATAGGGTCAAAAGAAGTTGGAATGATTGGAATATGGGGGATGGGAGGCATTGGTAAGACAACCATTGCTGCAGCTATATTTGACCACTTCTCTTCTCAATTTGAAGGATGTTGTTTCTTGGAAAATATAGGAGATGAATCAGATCGGCATGGATTGAATTTTTTGCATAACAAACTTCTAACAATGTTACTGGAAGAAGAAGAAAATCTCCATATCGATACAGTCCGATTAGGTAGCAATTTTAGTAACAGCAGGCTTAGTCATAAAAAAGTTCTGATTGTGCTTGATGATGTAAGAACTCCTGAGCAACTAGATTTTCTAGTTGGAGCGCGTACCTGCTTGGGACCGGGGAGTAGAGTCATTGTTACAGCTAGAGATAAGCACGCGCTAATTGAACGAGCTCATGAAATATATGAGGTGAAGCCATTAAACTTTCATGAATCTCTTCAGCTTTTCAGTTTAAGTGCTTTCAAGAAAGTGCACCCGGACATTGGCTATCAGCAGCTATCCGAAAGTGTGGTTAATTATGCAGGTGGCATTCCATTGGCTTTGAAAGTTTTAGGCTCATTATTTTGTAATAAGAGTACAGAAATATGGCAAAGTACAATGACTAAACTAAAGAAAATTCCCTGTAGGGAAATTCAGAATATCTTAAAACTGAGCTATGATGGGTTAGATGATACAGAGAAAGAAATATTTCTAGACATTGCCTGCTTTCTGAATGGAAAGGATAGACAACATGTGACAAGACTTCTAGATGCCTGTGGCTTCTATGCAGTTCCTGGTTTAGAAACCCTTTTGGAAAAAGCTCTAATTACAATTTCAAATAACAATCAAGTACAAATGCATGCCTTGATACAAGAAATGGGCCGGGAAATTGTTCGTCAAGAATCTACTAAAGACCCTGGTAGACGCAGTCGATTGTATGGTCAGGAAGAAGTTTACGATGTTCTGAAAAATAATATGGGCACTAGTGCAATTGAAGGAATTAGCCTAGATGTGTCCCAAATCAGAGATATGAATGTGAGCTCTGACATTTTTGTGAAGATGATAAACCTAAGATTTCTCAAATTCTACTCTCGCTCGGGTGAGAGATGTAATGTTTCCTTTCCTGCTGGTCTTGAGTCATTGTCTAATAAGTTAAGGTACCTCCATTGGAGTTCATATCCTTTGAAGTCTCTACCATCAGCATTTTCTCCTGAGAAACTTGTTGAGCTTTACATGCCAAACAGCCGTGTTCAAAGATTATGGGACGGAGTGCAGGATCTTACTAATTTAAAGAAAATGGACCTCAGCTGTTGTGAGAACTTGATACAGCTTCCAGATTTCTCCATGGCATCAAACCTCGAAACCATTAACCTCTCTAGATGTGTAAGGCTGCGTCATGTTCACGCATCTATTTATCTCTCCAAAAACTTGTCAATTTAA 2043 0.3921 MKEEEEGTFCSESKENDVFISFRGEDTRSNFTSHLHAALSRARVKTFIDYNLKKGDSISETLMKAIQDSYVSVVVFSENFASSTWCLDELTHIIKCLKQNQIVVVPVFYNVDPSHVRKQSGSYMIAFENHVLNLNHFNKVNDWREALTQATSLAGWDSRKYMLESELVEDIVQDVLQKLQCKYPKESKGLVGIDKHYAHLESLLRIGSKEVGMIGIWGMGGIGKTTIAAAIFDHFSSQFEGCCFLENIGDESDRHGLNFLHNKLLTMLLEEEENLHIDTVRLGSNFSNSRLSHKKVLIVLDDVRTPEQLDFLVGARTCLGPGSRVIVTARDKHALIERAHEIYEVKPLNFHESLQLFSLSAFKKVHPDIGYQQLSESVVNYAGGIPLALKVLGSLFCNKSTEIWQSTMTKLKKIPCREIQNILKLSYDGLDDTEKEIFLDIACFLNGKDRQHVTRLLDACGFYAVPGLETLLEKALITISNNNQVQMHALIQEMGREIVRQESTKDPGRRSRLYGQEEVYDVLKNNMGTSAIEGISLDVSQIRDMNVSSDIFVKMINLRFLKFYSRSGERCNVSFPAGLESLSNKLRYLHWSSYPLKSLPSAFSPEKLVELYMPNSRVQRLWDGVQDLTNLKKMDLSCCENLIQLPDFSMASNLETINLSRCVRLRHVHASIYLSKNLSI* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2132 680 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 678 - -
Mal5g2132 680 Gene3D - 348 431 IPR042197 -
Mal5g2132 680 ProSiteProfiles TIR domain profile. 14 179 IPR000157 GO:0007165
Mal5g2132 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Mal5g2132 680 Pfam NB-ARC domain 202 428 IPR002182 GO:0043531
Mal5g2132 680 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 678 IPR044974 GO:0006952
Mal5g2132 680 Gene3D - 13 176 IPR035897 -
Mal5g2132 680 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 156 IPR035897 -
Mal5g2132 680 PRINTS Disease resistance protein signature 290 304 - -
Mal5g2132 680 PRINTS Disease resistance protein signature 382 396 - -
Mal5g2132 680 PRINTS Disease resistance protein signature 626 642 - -
Mal5g2132 680 PRINTS Disease resistance protein signature 213 228 - -
Mal5g2132 680 SUPERFAMILY L domain-like 487 678 - -
Mal5g2132 680 Gene3D - 177 344 IPR027417 -
Mal5g2132 680 Gene3D Ribonuclease Inhibitor 521 680 IPR032675 -
Mal5g2132 680 Pfam Leucine Rich Repeat 607 626 IPR011713 -
Mal5g2132 680 Pfam TIR domain 17 190 IPR000157 GO:0007165
Mal5g2132 680 SMART till_3 15 153 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2132 Mal-Chr5 50468044 50471005 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2132 11 662 WRKY Transcription Factor Family AT4G12020 37.651 1.74e-115 379