Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2107 ATGACAACGCAACCGTCGATACCATCTCCTCCACCGCAACTACCACCACCACCGACGGCACCACCAACCGCACCGCCGTCCGAAGGCGGTGTTCGTGTCCGCTGTGCCGGTTGTCGGATGATCTTAACCGTCGCGCCTGGACTAACCGAATTCGCTTGTCCGACTTGTCGAATGGCGCAGATGCTTCCGCCTGAACTCATGGCTAGGGTCCACCAAACGGCACCGCCGTTAACTCCACCTGCGCAGAATTTGCCGGCGCACGGCATTGATCCTACTAAGATCCAGCTTCCTTGCGCTAAGTGTAAGGCGATCCTCAATGTTCCGCATGGATTGTCGCGATTTTCGTGTCCACAGTGTAAAGTTGATCTTGCGGTTGATCTGTCGAAGGTTAAACAGTTTCTTCCTCCGCCGCCGCTTGAAGAAGTTAACGAGGTTGCTGTTGAAGTGGAACGTGATGAAGATGAAGGCGGCATGGTTGGAGAAACATTTACAGATTATCGACCACCAAAAGTATCTATTGGACCTCCACACCCAGACCCTGTTGTGGAGACATCTTCCTTGTCTGCAGTGCAGCCACCGGATCCTACCTATGATCCAAAAACTAAAGATAATTTGGAAAGTTCAAAGGCTTTGTCATGCTTGCAAATTGAGACCTTGGTCTATGCTTGTCAGAGACACCTTCAGCACCTCCCCAGTGGAGCTAGGGCAGGATTCTTTATTGGAGATGGAGCTGGTGTAGGTAAAGGTCGAACAATTGCAGGTCTAATTTGGGAGAACTGGCACCATGGAAGGAGAAAAGCACTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGACGCTAGAAGAGACTTGGATGATGCGGGTGCAACATGTATTGAAGTGCATGCTTTGAACAAACTGCCTTATTCTAAGCTTGATTCAAAGTCTGTTGGGATCAGGGAGGGAGTTGTTTTCTTGACATACAATAGCCTTATAGCATCTTCAGAGAAAGGTCGTTCTCGTCTCCAGCAGCTTGTGCAGTGGTGTGGACCAGGGTTCGATGGCCTTGTAATTTTTGACGAGTGTCATAAAGCAAAAAATTTGGTCCCTGAAGCTGGTAGTCAGCCAACACGAACCGGAGAAGCAGTTCTTGAAATTCAGGATAAACTACCTGAAGCTCGTGTTGTTTATTGCTCAGCAACTGGAGCATCTGAACCCCGCAATATGGGTTATATGGTTAGACTTGGTCTTTGGGGAGATGGAACTTCTTTCTCCGAGTTCCGTGAATTTCTTGGTGCTCTTGATAGAGGGGGTGTTGGAGCTCTAGAATTAGTTGCCATGGACATGAAAGCAAGGGGAATGTATTTATGTCGGACACTTAGCTACGAGGGTGCTGAGTTTGAAGTTATTGAAGCACCATTAGAAGATAAAATGATGGACATGTATAAAAAGGCAGCAGAATTTTGGGCAGAATTACGAGTAGAATTGCTGTCTGCTAGTGCCTTCCTAAATGATAAACCTAACACTAGTCAACTATGGCGATTATACTGGGCAAGCCACCAGCGTTTCTTTAGACACATGTGTATGTCTGCTAAAGTACCTGCTACTGTAAGACTAGCAAAGCAAGCATTAGTTGATGAAAAATGTGTAGTCATTGGCCTTCAGAGTACTGGCGAAGCAAGGACAGAGGAGGCTGTGACAAAATATGGTTCTGAACTTGATGACTTTGTTTCTGGACCTCGGGAATTGCTGCTTAAATTTGTGGAAGAATATTACCCGTTACCTGAAAAACCTCAACTCCTTCCAGGAGAGGATGGTGTTAAGGAGCTCCAAAGGAAGCGGCACTCTGCAACTCCTGATGTTTCATTAAAAGGAAGGGTCAGAAAAGTAGCCAAGATGCAGCCTCCTAGTGATGCAGAAAGCGACGAAGAATCTGAAACTGATTCTGGCATTGAATCTAATGACTCTGATGAGGAGTTTCAGATATGTGAAATTTGTACTACTGAGGAGGAAAGAAAAAAATTGCTACAGTGTTCCTGCTGTGGTAAATTAGTCCATTCCACATGCTTGATGCCACCACCAATTGGTGATATAGTTCCTGAAGAGTGGTCATGCCATTTGTGTAAGGAAAAAACAGATGAATATCTTCAAGCAAGGCAGGCCTACATAGCTGAACTCCAGAAGAGGTACGATGCAGCCTTGGAACGTAGGACAAAAATATTAGAGATCATTCGTTCTTTGGATCTTCCAAATAATCCTTTGGATGACATTACTGACCAGCTAGGGGGCCCCGATAAAGTTGCAGAAATTACAGGAAGGAGAGGCATGCTTGTGAGGGGCCCTACTGGAAAGGGTGTAACATATCAGGCTCGTAATACAAAGGATGTCACTATGGAAATGGTTAACATGCACGAAAAGCAGCTTTTTATGGATGGTAAAAAGTTTGTTGCTATTATCTCTGAAGCTGGATCAGCTGGTGTTTCTTTGCAGGCAGATAGGAGAGCAGCAAATCAGAAAAGAAGGGTTCATTTAACGCTAGAGCTTCCATGGAGTGCTGACCGTGCAATTCAGCAGTTTGGAAGAACCCATAGATCAAATCAAGCTTCAGCACCAGAATACAGGATACTCTTTACTAATCTTGGGGGAGAACGACGATTTGCTTCAATTGTTGCGAAAAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGACCGCAGGGCTGGGCCTTCATTAAGTGCTTATAATTATGATAGTGCTTATGGAAAGAGGGCACTGATGATTATGTACAAAGGAATAATGGAGCAGGATTCTCTACCTGTTGTACCTCCGGGATGTTCATCTGACAGACCAGATACTATTCAAGATTTCATTATGCAGGCAAAAGCTGCTCTTGTATCTGTTGGGATAGTTAGGGACACAGTTCTTGTAAATGGTAAAGATTCTGGAAGGTTATCTGGTCGAATTATTGATTCAGATATGCACGAAGTTGGACGATTTCTCAACCGGCTTTTGGGACTACCTCCTGATATTCAGAATGGGCTATTTGAGTTATTTGTGAGTATCTTGGATCTTCTTGTTCGGAATGCTCGCATTGAAGGTAACCTCGACACGGGCATTGTTGACTTGAAAGCTAATGTCATTGAACTACAGGGGGCTCCAAAGACAGTTCATGTTGATCAATTGACTGCGGCTTCAACCGTTTTGTTTACATTCATCTTGGATCGTGGGATCACATGGGAGTCAGCAAGTAACATGCTGAATGAAAAGCAAAAGGATGGGCTTAGCTCAGCCAATGATGGCTTCTATGAGTCCAAGAGGGAGTGGTTGGGAAAACGTCATTTCATTTTAGCATTTGAAAGCTCTGCTTCTGGTATGTATAAGATAGTCCGTCCTCCTGTTGGGGAATCAAACCGGGAGATGCCTCTATCTGAGTTAAAAAGTAAATACAGAAAAGTTTCATCCTTAGAAAAGGCTCAAACTGGTTGGGAAGAGGAATATGAAGTTTCATCTAAACAGTGCATGCATGGTCCCAAATGTAAGATTGGCAACTTCTGTACAGTGGGCAGAAGACTACAGGAAGTAAATGTCTTGGGTGGTCTCATTCTTCCTGTTTGGGGAACCATAGAGAAGGCCCTTGCTAAGCAGGCCCGCCTAAGCCATAGGAGGCTACGTGTTGTACGCATAGAAACTACTGTGGATAACAAACGAATTGTTGGACTTCTTGTTCCTAATGCAGCTGTTGAAACTGTGCTTCAAGGTTTAGCATGGGTTCAAGAAATTGATGATTGA 3768 0.4477 MTTQPSIPSPPPQLPPPPTAPPTAPPSEGGVRVRCAGCRMILTVAPGLTEFACPTCRMAQMLPPELMARVHQTAPPLTPPAQNLPAHGIDPTKIQLPCAKCKAILNVPHGLSRFSCPQCKVDLAVDLSKVKQFLPPPPLEEVNEVAVEVERDEDEGGMVGETFTDYRPPKVSIGPPHPDPVVETSSLSAVQPPDPTYDPKTKDNLESSKALSCLQIETLVYACQRHLQHLPSGARAGFFIGDGAGVGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDAGATCIEVHALNKLPYSKLDSKSVGIREGVVFLTYNSLIASSEKGRSRLQQLVQWCGPGFDGLVIFDECHKAKNLVPEAGSQPTRTGEAVLEIQDKLPEARVVYCSATGASEPRNMGYMVRLGLWGDGTSFSEFREFLGALDRGGVGALELVAMDMKARGMYLCRTLSYEGAEFEVIEAPLEDKMMDMYKKAAEFWAELRVELLSASAFLNDKPNTSQLWRLYWASHQRFFRHMCMSAKVPATVRLAKQALVDEKCVVIGLQSTGEARTEEAVTKYGSELDDFVSGPRELLLKFVEEYYPLPEKPQLLPGEDGVKELQRKRHSATPDVSLKGRVRKVAKMQPPSDAESDEESETDSGIESNDSDEEFQICEICTTEEERKKLLQCSCCGKLVHSTCLMPPPIGDIVPEEWSCHLCKEKTDEYLQARQAYIAELQKRYDAALERRTKILEIIRSLDLPNNPLDDITDQLGGPDKVAEITGRRGMLVRGPTGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKFVAIISEAGSAGVSLQADRRAANQKRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRILFTNLGGERRFASIVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKRALMIMYKGIMEQDSLPVVPPGCSSDRPDTIQDFIMQAKAALVSVGIVRDTVLVNGKDSGRLSGRIIDSDMHEVGRFLNRLLGLPPDIQNGLFELFVSILDLLVRNARIEGNLDTGIVDLKANVIELQGAPKTVHVDQLTAASTVLFTFILDRGITWESASNMLNEKQKDGLSSANDGFYESKREWLGKRHFILAFESSASGMYKIVRPPVGESNREMPLSELKSKYRKVSSLEKAQTGWEEEYEVSSKQCMHGPKCKIGNFCTVGRRLQEVNVLGGLILPVWGTIEKALAKQARLSHRRLRVVRIETTVDNKRIVGLLVPNAAVETVLQGLAWVQEIDD* 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2107 1255 MobiDBLite consensus disorder prediction 617 649 - -
Mal5g2107 1255 Gene3D - 203 406 IPR027417 -
Mal5g2107 1255 PANTHER OS08G0223700 PROTEIN 29 1255 - -
Mal5g2107 1255 MobiDBLite consensus disorder prediction 617 632 - -
Mal5g2107 1255 MobiDBLite consensus disorder prediction 1 25 - -
Mal5g2107 1255 ProSitePatterns Zinc finger PHD-type signature. 656 701 IPR019786 -
Mal5g2107 1255 Pfam C-terminal domain on Strawberry notch homologue 745 1034 IPR026937 -
Mal5g2107 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 420 IPR027417 -
Mal5g2107 1255 SUPERFAMILY FYVE/PHD zinc finger 646 707 IPR011011 -
Mal5g2107 1255 MobiDBLite consensus disorder prediction 158 203 - -
Mal5g2107 1255 SMART PHD_3 655 702 IPR001965 -
Mal5g2107 1255 Pfam P-loop containing NTP hydrolase pore-1 176 476 IPR039187 -
Mal5g2107 1255 MobiDBLite consensus disorder prediction 633 649 - -
Mal5g2107 1255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 618 708 IPR013083 -
Mal5g2107 1255 PANTHER STRAWBERRY NOTCH-RELATED 29 1255 IPR026741 GO:0006355
Mal5g2107 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 800 905 IPR027417 -
Mal5g2107 1255 ProSiteProfiles Zinc finger PHD-type profile. 653 704 IPR019787 -
Mal5g2107 1255 MobiDBLite consensus disorder prediction 1 29 - -
Mal5g2107 1255 Pfam PHD-finger 655 704 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2107 Mal-Chr5 49686091 49708485 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal5g2107 AAA_34 4.8e-132 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2107 - - gmx:100808670 2215.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2107 5 49686091 49708485 Mal5g2107 5 49686091 49708485 ECH