Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2104 ATGAGAAATTTCTCTGAATTTTCTACAACTCAAAGACCAAGTCCGAGAATGACTTCAAGGAGTGGACCGAATTCACGTAGTGATAGTTTAGAGAGCACAAGCAATGCACATATTAAGCCACATACAGGAGGTGATGTGAGATGGGATGCAATCAACATGGTTTCAAGAGGTTCAAATTCAAATCTTAACTTTGGTCATTTTCGGCTTGTAAAGCGCGTTGGTTATGGTGACATTGGAAGTGTATATCTTGTTGAGCTAAAAGGGACAGGAACATTCTATGCTATGAAATTAATGGATAAGGCTTCACTTGCTAGCAGAAATAAGCTGCTTAGAGCACATACTGAAAAGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCGACTTTGTATTCTTATTTTGAAAATGAGAAGTATTATTGTTTGGTCATGGAGTTTTGTAGTTGTGGTAGTTTGCATAACCTCAGAATGAAGCAACCCAACAAGCATTTCACCGAAGATGCTGCACGGTTTTATTGTTCAGAGATTCTATTAGCACTGGAGTACCTCCACATGTTAGGAATAGTATACAGAGATTTAAAACCAGAAAACGTTCTAGTTCGTGACGAAGGTCACATAATGCTATCAGATTTCGACTTATCCCTCCGTTGTTCTGTTAGTCCCACACTCGTCAAATCCTCCTCCGCACACGTAACCAGCACCACCACATCCATCGGTATCCTTGACAACGAACATGCAGTACAAGGTTGCATGCAACCGTCAAGTTTCTTCTTCCCAAGAATCCTCCCATACAAAAGAAACCGAAAATCAAAATCAGATTTCGGTCTCATGGTAGGCGGCCGTCTTCCAGAATTAATGGCAGAACCAACTAACGTCCGATCAATGTCATTTGTTGGGACACATGAGTATCTTGCACCAGAAATCGTGCGTGGTGAGGGACACGGTAGTGCTGTTGATTGGTGGACGTTTGGGATATTTTTATACGAGCTTTTATACGGAACAACACCATTTAAAGGTAATGGAAACCGCGCTACGCTTTATAATGTCGTTGGACAACCTTTAAGGTTTCCTGAACATCCTTATGCTAGTCCAAATGCTAGAGATCTTATTAGAGGTTTGTTGGTTAAAGAACCACATAAAAGAATTGCTTATAAAAGAGGTGCTACCGAGATTAAACAACATCCATTTTTCGAAGGTGTTAATTGGGCTTTGATTCGTAGTTCTACTCCTCCTATTATACCGGAACCGTTTGATTTTAGTCAGTATGTTAGTAAGGAAACTGTTGTGGCTGCTGCTGCTGATAACAAGAAGATTGTTGATATTGTTAGTGATAAAAATAGTAAGATGCAGAATGATTCTTCTTATGAAGATTTTGAGTATTTTTAG 1386 0.3975 MRNFSEFSTTQRPSPRMTSRSGPNSRSDSLESTSNAHIKPHTGGDVRWDAINMVSRGSNSNLNFGHFRLVKRVGYGDIGSVYLVELKGTGTFYAMKLMDKASLASRNKLLRAHTEKEILGLLDHPFLPTLYSYFENEKYYCLVMEFCSCGSLHNLRMKQPNKHFTEDAARFYCSEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHVTSTTTSIGILDNEHAVQGCMQPSSFFFPRILPYKRNRKSKSDFGLMVGGRLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLYGTTPFKGNGNRATLYNVVGQPLRFPEHPYASPNARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALIRSSTPPIIPEPFDFSQYVSKETVVAAAADNKKIVDIVSDKNSKMQNDSSYEDFEYF* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2104 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Mal5g2104 461 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 16 461 - -
Mal5g2104 461 ProSiteProfiles Protein kinase domain profile. 67 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2104 461 CDD STKc_phototropin_like 66 416 - -
Mal5g2104 461 SMART serkin_6 67 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2104 461 Gene3D Transferase(Phosphotransferase) domain 1 151 220 - -
Mal5g2104 461 MobiDBLite consensus disorder prediction 1 41 - -
Mal5g2104 461 Pfam Protein kinase domain 68 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2104 461 Pfam Protein kinase domain 291 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2104 461 PANTHER FLIPPASE KINASE 1-RELATED 16 461 - -
Mal5g2104 461 Gene3D Phosphorylase Kinase; domain 1 66 150 - -
Mal5g2104 461 SUPERFAMILY Protein kinase-like (PK-like) 64 424 IPR011009 -
Mal5g2104 461 MobiDBLite consensus disorder prediction 1 39 - -
Mal5g2104 461 Gene3D Transferase(Phosphotransferase) domain 1 273 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2104 Mal-Chr5 49575665 49577798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2104 30 461 AGC Kinase Gene Family AT1G79250 70.824 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal5g2104 Pkinase 6.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2104 - - gmx:100802478 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2104 5 49575665 49577798 Mal5g2104 5 49575665 49577798 ECH