Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2100 ATGAACAAGAACAAATGCTTTATGGATTGGCTTTCTCGAAATCCCCCACGTGGACACTTCTTTTTGATATCTGGTGAGAAAGACTTCGACTTCTCCAGCACATTGCATCAGACTTGGTGGAGGAGGAATGGCAACTTCTTGCTTGCATGTCCAGGAAAGGCTCATGGTTATGTCTGCAAAGTAGCAACTATAGTGTGGCAGTGGTCTTCAGTGCTCAAGGGGAAATATTTTACTGGAAAATATATCAAGCCTCTTCCTGATTGGTATATTAAGGCGTGGGTGCAGGTGCCTCTTGAATATCCTCCCGGGTGGTATAGAAACTCGAAGGCGCCTCATGAAAACCCCTTCTCAGCTGCTGAGGAGCCCACATATTCACAAAATGCAAAGATCCATGAACCTTCCACGTACATAAAGTTGTTTGAAGTTCAAAAGTCGGTTTCTACGCAGATGCATTGA 456 0.4452 MNKNKCFMDWLSRNPPRGHFFLISGEKDFDFSSTLHQTWWRRNGNFLLACPGKAHGYVCKVATIVWQWSSVLKGKYFTGKYIKPLPDWYIKAWVQVPLEYPPGWYRNSKAPHENPFSAAEEPTYSQNAKIHEPSTYIKLFEVQKSVSTQMH* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2100 151 PANTHER LIMKAIN B LKAP 8 149 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal5g2100 151 PANTHER EMB|CAB71880.1 8 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2100 Mal-Chr5 49537495 49538591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2100 10 74 C2H2 Transcription Factor Family AT5G61190 41.538 1.68e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2100 - - mtr:MTR_7g077430 233.417