Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2079 ATGGAGGAAGAGGATAACGTCCACTACTATGACGGTAAGAGCAAAAAAAGATCATCTTTGGACAAACATATCCTGCTATTCCCACCCACGTCTTATTCAACTTACATCTTAGGGACTCCTGTGGACTTTGAAGTAGGTAGATTTTACAAAATTGACCATTCAAACCTTCCAACAAATTGTCCTGTTCAAATAAAATGTGTTAACCTTGTAATGGTCTGTGACAAAGGGGAGAAACAAGTATCTCTAAGCCTTCACTCTCTTCACACACACTTCAACGACCAAAGCTTTGGAAAGCCAGAAGGGAAGAAAATCCCTGCACTTGACGAGAAATACGTGATGGGAATTGAATTTCTAAGGAATTTTGCAGAGAAAAGAAACTCATGGAGCTTCTGGGTCTCTCCCACTAACAGCCCAGTTATCAATGATGGTGCTACTGGTTTGGTTTCCAAGCAGGGTTCATGTTGGTCTGAGCTCAAGTTCACTGGTTTGATGCAGTGGGGCCAACGCCGCCAAGTTCGGTTCTTGCGCCGTCATGAGGAGCAAAAGGTTGAAACTTTACCTCAACTTCAGAAGGAAAAAGGTGTCATTTTTAAGCCCAGAGAAGGGACTAATGTGAAGAAGAGAAAGAATGTTGAAAAGGAAGAAATGGAAGCTGTCAAGGTAGCTCCTTTTGAGGAACAGAGGATTACTCGTCAATCCAAGAAAAATCAACCAGGTGTTGTGAGTAGTAGCAGTGGGGCTAAAAAGTTTAAGAAAAATCACAAAGGTGTTGTGAGTAGTAGCAGTGGGGATAAAAAGTCTGAGAAAGCAGTGAATGACACCAAGAAGCAGGAACTTGTGGTTTATGCTAGAAAGAAGGGAAAAGTATCAATTGACAGATGGGCTGCTGAGAGGTATAAGTTAGCAGAGGAGAACATGTTGAAGATTATGAAGGAAAAAGGAGCTGTGTATGGAAACTCAATAATGAGGCAAGAGTTGAGATCAGAAGCAAGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCAGGAGGAGTTGAAAGATTCAGACGGCGACACAATGCGGAAGGTTCAATGGAATACTGGTTAGAGAGTGCTGATCTTGCTGATATGAGAAAGGAAATGGGTGTACAAGACCCTTACTGGACTCCTCCCCCTGGTTGGAAGCCTGGAGACAGCATTTCACCAGATCATGTTACTAGTAATCAACTCAGAGAGATAAAGGAGGAAATAATTAAGTTGAAACGAGAAATGAGGGATCTCACATCAAAAAGAGATGAGGAAGCATTGGCCATTGTGACTACTCCTAGTTCTTGTTTCTCAAGTTTGAATTTTGAGGACTATGGCTCCCAGGTTTCTAAGCAGGAGATTTATGTGGAGCTGGTTCATAAAAAGGCTAAAATTGAAGAACAACTAAAAGAAATTTCTTTGGCTTTGAATGGCATGGAGGATCAAATGGGAATGTTGAAACCAACACTAGAAGAACCAATGTCAGAATCATTAACACCACCAGCCTTATTGCTTGGACCAACATCATTGGCAGAAAGCATGGGAGAAGAGACAAAATCAGTGGACACACAAATGGTTGTAGGAAGCAGATGGCTTCCAAATTTGCAAACCAAGAGGGACCTTTATGTGGCCAAATATGAGTTTGTCTCCACATGTTTTAACCAACCTTGA 1710 0.4175 MEEEDNVHYYDGKSKKRSSLDKHILLFPPTSYSTYILGTPVDFEVGRFYKIDHSNLPTNCPVQIKCVNLVMVCDKGEKQVSLSLHSLHTHFNDQSFGKPEGKKIPALDEKYVMGIEFLRNFAEKRNSWSFWVSPTNSPVINDGATGLVSKQGSCWSELKFTGLMQWGQRRQVRFLRRHEEQKVETLPQLQKEKGVIFKPREGTNVKKRKNVEKEEMEAVKVAPFEEQRITRQSKKNQPGVVSSSSGAKKFKKNHKGVVSSSSGDKKSEKAVNDTKKQELVVYARKKGKVSIDRWAAERYKLAEENMLKIMKEKGAVYGNSIMRQELRSEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGSMEYWLESADLADMRKEMGVQDPYWTPPPGWKPGDSISPDHVTSNQLREIKEEIIKLKREMRDLTSKRDEEALAIVTTPSSCFSSLNFEDYGSQVSKQEIYVELVHKKAKIEEQLKEISLALNGMEDQMGMLKPTLEEPMSESLTPPALLLGPTSLAESMGEETKSVDTQMVVGSRWLPNLQTKRDLYVAKYEFVSTCFNQP* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2079 569 PANTHER PROTEIN DYAD 38 526 IPR044221 GO:0007131|GO:0051177|GO:0051321
Mal5g2079 569 Coils Coil 414 434 - -
Mal5g2079 569 MobiDBLite consensus disorder prediction 227 271 - -
Mal5g2079 569 PANTHER PROTEIN DYAD 38 526 - -
Mal5g2079 569 Coils Coil 475 495 - -
Mal5g2079 569 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2079 Mal-Chr5 47826314 47830026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2079 289 381 PHD Transcription Factor Family AT5G22260 36.082 1.80e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2079 - - mtr:MTR_7g105920 710.679