Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2072 ATGGTCTCAAAAACAAGAACCTCTATCATTAATATTGTTATTACATTAGCCTTATTCACATCCAATGTTGTATTATCAGATGACACAATTCCAATTCCTTCTGACAGAACCCAATTAGATTCATGGTTTAATACCAATGTGGGTCCATTAGAACAAAGAAAAAGTACCCTTGATCCGGCATTGGTGACTGCAGAGGGTGGTACAAAAGTTATTAAAGTAATGCAAGATGGAAGTGGAGATTTCAAAACCATCAACGATGCAATTAATAGCATACCTACCGGAAACACTATGCGTGTGATTGTGAACATTGGTGGTGGGAATTATAACGAGAAAATCAAAATTGAGAGGACAAAACCTTTTGTTACATTGTATGGGACACCACAAAATATGCCAAATTTGACATATGGTGGAACTGCACAACAATATGGCACAGTTGATAGTGCTACATTGATTGTTGAATCAGATTATTTTGTAGCTGCGAACATCCTCATATCTAATTCTGCACCAAGACCTGATGGAAAAAGGGCAGGGGCTCAAGCGGTTGCATTGAGAATTTCTGGTGACAAAGCAGCATTTTATAATTGCAAGTTGCTCGGGTTTCAAGACACAATTTGTGATGACAGACATAATCATTTTTTCAAGGATTGCTTAATTCAAGGCACGGTGGATTTCATTTTTGGAAGTGGGAGGTCACTATATTTGAAAAATGAATTGAGAGCGCTTGGTGACAGTGGACCGTCAGTGATAGTAGCACAAGCAAGAAAAAGTGAATCAGAGGATACCTTATACTCATTTGTGCATTGTGATGTTACTGGGACTGGAACGAGTACTTTCTTAGCCAGAGCATGGATGTCCAATCCCAAAATTATCTTTGCTTACTCAACTATGACCAATGTTGTTGATCCAAAAGGGTGGGATAATGCCATGCACCCTGAATTTGACAAAACTTCATACTATGGAGAATATCAGAACACGGGACCAAAGTCAGATCCCAAAGGGCGTGCAAGTGTCACAAAGCAACTAAGTGAAGCAGAGGTTAAACCTTTCATTACGCTTGGAATGATTCAAGGATCTAAATGGCTCCTTCCTCCTCCTAAAGTCTAA 1104 0.3913 MVSKTRTSIINIVITLALFTSNVVLSDDTIPIPSDRTQLDSWFNTNVGPLEQRKSTLDPALVTAEGGTKVIKVMQDGSGDFKTINDAINSIPTGNTMRVIVNIGGGNYNEKIKIERTKPFVTLYGTPQNMPNLTYGGTAQQYGTVDSATLIVESDYFVAANILISNSAPRPDGKRAGAQAVALRISGDKAAFYNCKLLGFQDTICDDRHNHFFKDCLIQGTVDFIFGSGRSLYLKNELRALGDSGPSVIVAQARKSESEDTLYSFVHCDVTGTGTSTFLARAWMSNPKIIFAYSTMTNVVDPKGWDNAMHPEFDKTSYYGEYQNTGPKSDPKGRASVTKQLSEAEVKPFITLGMIQGSKWLLPPPKV* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2072 367 Pfam Pectinesterase 71 357 IPR000070 GO:0030599|GO:0042545
Mal5g2072 367 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Mal5g2072 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 362 - -
Mal5g2072 367 PANTHER PECTINESTERASE 63-RELATED 36 362 - -
Mal5g2072 367 Gene3D - 67 363 IPR012334 -
Mal5g2072 367 SUPERFAMILY Pectin lyase-like 69 361 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2072 Mal-Chr5 47464078 47466024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2072 6 367 Carbohydrate Esterase AT5G07410 55.647 3.87e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2072 K01051 - gmx:100786427 577.785