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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Mal5g2045
ATGGGTCGTCGCAAAATTAAGATTGCGATGGTGAAAGACTCTGGCGTGAGGCAAGTCACGTTCTCAAAGCGTCGAACGGGGTTATTCAAAAAAGCAAACGAGCTTGCCATCTTGTGTGGGACCGCAATTGTTATTGTTGTGTTCTCTCCCGGGAATAAACCTTTCTCTTTTGGCCACCCGAGTGTTGATGCTATTGCATCAAAATTTCTTCAACAAGAGCCCAATCTAAATTATGTCCTAGAAACCCCTCCTTCCTCCAACATAGAGGATCTGAAACAACAACTTGAGGAGGTGATGGCCGAAATAGATGAGGCTGATAAGGAAGCTAAGGCCTATGATGAGACACTGAAAGAATACAAAGCGACCAACCTCACTCAGCTTAAGGAATCGAAAGATTCATTAATAGAGCTTAAAGACATGGTGAAGTCACGTCTTTGTGATTTAGAGATATCACAATTTATGATGCTTCTCGCAAAGGAGCCCGTGGTTGGAATAAAAAACCAAGTCACGAAAAAGAAAGGAAAAATTTAA
531
0.42
MGRRKIKIAMVKDSGVRQVTFSKRRTGLFKKANELAILCGTAIVIVVFSPGNKPFSFGHPSVDAIASKFLQQEPNLNYVLETPPSSNIEDLKQQLEEVMAEIDEADKEAKAYDETLKEYKATNLTQLKESKDSLIELKDMVKSRLCDLEISQFMMLLAKEPVVGIKNQVTKKKGKI*
177
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Mal5g2045
176
Gene3D
-
15
83
IPR036879
GO:0003677|GO:0046983
Mal5g2045
176
PRINTS
MADS domain signature
23
38
IPR002100
GO:0003677|GO:0046983
Mal5g2045
176
PRINTS
MADS domain signature
38
59
IPR002100
GO:0003677|GO:0046983
Mal5g2045
176
PRINTS
MADS domain signature
3
23
IPR002100
GO:0003677|GO:0046983
Mal5g2045
176
PANTHER
MADS BOX PROTEIN
2
169
-
-
Mal5g2045
176
SUPERFAMILY
SRF-like
1
72
IPR036879
GO:0003677|GO:0046983
Mal5g2045
176
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
12
57
IPR002100
GO:0003677|GO:0046983
Mal5g2045
176
ProSiteProfiles
MADS-box domain profile.
1
61
IPR002100
GO:0003677|GO:0046983
Mal5g2045
176
Coils
Coil
85
122
-
-
Mal5g2045
176
PANTHER
AGAMOUS-LIKE MADS-BOX PROTEIN AGL29
2
169
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Mal5g2045
Mal-Chr5
46134556
46135086
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Mal5g2045
1
159
Type I MADS-box Gene Family
AT2G34440
43.931
1.30e-36
123
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-M-type
Mal5g2045
SRF-TF
1.7e-21
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Mal5g2045
-
-
mtr:MTR_4g131030
182.57
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