Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1968 ATGCGGAATATTTGGATCTCTCGCAACAAATTTATTTTTGAGGGAACAACTTCTGTGAAGTACCAGATCACAACATCTATATTTACTCAACTACAGGTTTCTAAGCAGGCATTTGGAAGTCCAACCTCCCACTTCCCTCGAACAACCCGTGAGGTGTGTTGGAAAAAAGGAGATGTGGATGTCATGGTTCTCAATGTGGATGGAAGTGCTCTTACTAATCCAGCGAAGGCAGGGTTTGGTGGCTTGGAAATTTGTCATAGAGATTTGAAATTGGAAAACACTCTCTTGGACGGAAATCCATCCCCTCGGCTTAAAATTTGTGACTTCGGTTACTCCAAGTCTGCAATACTGCACTCTCAACCAAAGTCAACAGTTGGAACTCCTGCATACATTGCTCCCGAGGTTCTGTCACGAAAGGAGTACGATGGAAAGCCTATGATGCCACCTTATGGACATCCTTATGCAGCAATGTATCCACATGGAGGGGTTTATTCGCACTCTGCAGTTCCTATTGGGCAACATCCACATAGTCAAGTAATTTCATCTTCACCTGCTTTGTTGTTCCCTTTCTCCCTTCCTCCTTTTCAATTTCAAATTTTTGTTGCTCATGTGTTTGGGGCTGAGATGTGA 630 0.4349 MRNIWISRNKFIFEGTTSVKYQITTSIFTQLQVSKQAFGSPTSHFPRTTREVCWKKGDVDVMVLNVDGSALTNPAKAGFGGLEICHRDLKLENTLLDGNPSPRLKICDFGYSKSAILHSQPKSTVGTPAYIAPEVLSRKEYDGKPMMPPYGHPYAAMYPHGGVYSHSAVPIGQHPHSQVISSSPALLFPFSLPPFQFQIFVAHVFGAEM* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1968 209 Pfam Protein kinase domain 83 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1968 209 Gene3D Transferase(Phosphotransferase) domain 1 75 146 - -
Mal5g1968 209 PANTHER SERINE/THREONINE KINASE 82 144 - -
Mal5g1968 209 Pfam G-box binding protein MFMR 143 170 IPR012900 -
Mal5g1968 209 SUPERFAMILY Protein kinase-like (PK-like) 83 143 IPR011009 -
Mal5g1968 209 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1968 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Mal5g1968 209 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK5 82 144 - -
Mal5g1968 209 SMART serkin_6 6 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1968 Mal-Chr5 42833660 42839415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1968 83 143 CBL-interacting serine-threonine protein kinases AT5G58380 53.125 2.47e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mal5g1968 Pkinase 2.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1968 K14498 - gmx:100817713 131.339