Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1964 ATGGCGGAAGTTCTCACCCCCATTCCCTCCGATTCCCTCGACCAATCCTCCCCAACCACCACCTCCCCTCCTCCACCACCGCCACCACCACAATCACCTCCTCCCTCCTCCGCCCCCGATTCCGATCTCCCTCCACCTCCTCATCAACCTCCACAATCCTCCTACCGCCGTCGTGACTTCCGCCGCGATGATAGAGATAGAGATTTCGATCGTCCTCCACCTCGCCGCGATTACTATGACCGTAACAACATGTCGCCGCCGAGGGATAGAGATAGAGATTTCAAACGCCGGCGTAGTCCGAGTCCTCCTCCGTATCGTGACCGCCGTCATTCTCCGCCGCAGCGGCGATCCCCTCCGCATTACAATTATAAGCGTTCCAGGAGAGGTGGTAGTCCACGTGGCGGTTATGGACCCGATGATAGATCTGGATATGATCACTACGGTGGTTATGATAGGGGTGGAAGAGGTGGCTATGATAGGGGTGGCAGAGGTGGTAATGATAGGGGTGGAAGAGGTGGTTATGGTGATGACAGGGGTTATGGTAGGTTTGGACATCGTTCTGCAGGAGGATATCAAAATGGGAACTCTGGTATGAACTCCAATCGTAATTATGTAGACTTGCCGAGTGGCGGTGGGCAAAGAGAAGGGTTGATGTCCTATAAACAATTCATTCAGGAGCTTGAGGATGATATTCTACCAACTGAAGCAGAACGTAGGTACCAAGAATACAGATCAGAGTACATTTCTACCCAAAAAAGAGCTTATTTCAATGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAGTGCTCGACAGCTGGCAAAGGATTTTTTACTAGATTTGCAGAGTGGAACATTAGATCTAAATCCAGGTTTAAGTGCCTCTTCATCCAGAAAATCAGGGCAAGCTAGCGAGCCAAATTCAGAGGAGGAAGCGGATGGCAAACAAAGAAGAAATGGATGGGGTTCTAATAAACAAAGTGATTTCTCAGCTGCTCCAAAGACTCATCCTATCAGTTCTGAACCTTGGCGAATACAAGCAGATGTTCAACAGGCTCAGGCCCTTGTTCGCAAGCTAGACACAGAAAAGAGGATTGCAGATAATATTTTATGCAGCAGTGATCACAATAAAACTGATGATAAGTCTCACAGTGGATCTGTGGGTCCCACAGTCATTATACGAGGCTTAACATCTGTTAAGGGTTTAGAGGGAGTTGAGCTTTTGGACACACTTATTACATATCTGTGGCGGATTCATGGTGTAGATTATTATGGCATGATTGAGACTAATGAGGCTAAGGGTTTTAGGCATGTGAGGCCAGAAAAAACAGGGTATGAAGAAACAGGTAAATCAGGGTCTGAATGGGAGAAGAAACTTGACTCATTTTGGCAGGGAAGGTTGAATGGTCAGGATCCATTGGAAGTAATGGCTGCTAAGGAGAAAATAGATGCTGCAGCAGTTGAAGTATTGGATCCATATGTTAGAAAAATAAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGGGCTAAGGGCTGCACAAAACTTTTTCATGCTGCTGAATTTGTGTACAAACATCTGAAGCTAAAGCACCCAGAGCTTGCTCTTGAACAAACTTCAAAATTGCGTGAGGATCTCTATACTCAAAATTACATGAACGATCCAGATGCTCCTGGTGGAAAGCCTGTCATGCAGCAACCTCAGAAGGAGAACAGACCTTTAAATCGAAGGTTCGGTCTGGAGGGCCGATTGGGAGATGATCGTGGTAATCGTCGAGACTATGAACGGAATGACAGAATAAATGGAGATAGACCTAATTCCCCATCCCGTGAAAGGCAGTCTAAAGCACTTGAGATGGGAAACCATGATGAAACAATGCAAGACACTTATGCAGGGCCTGGTGTTCCTACTTTTGCCTCAGATATGCCTCCCCCAGTATTGATGCCTGTACCTGGTGCTGGGCCATTAGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTTAGAGAGCAAGGAGGACCATCTTCATATGATGCATCTGGAGTAAATATGTCTGGCCCTCTTCATATGGGTGGACCGGCACCAATAATTGCTCTTCCTCCAGGTTTTAGACCAGATCCTCGGAAGATGCGAAGTTATCAAGATTTGGATGCTCCAGACGAAGAAGTCACCGTGATAGACTATCGGAGTTTGTAG 2250 0.4658 MAEVLTPIPSDSLDQSSPTTTSPPPPPPPPQSPPPSSAPDSDLPPPPHQPPQSSYRRRDFRRDDRDRDFDRPPPRRDYYDRNNMSPPRDRDRDFKRRRSPSPPPYRDRRHSPPQRRSPPHYNYKRSRRGGSPRGGYGPDDRSGYDHYGGYDRGGRGGYDRGGRGGNDRGGRGGYGDDRGYGRFGHRSAGGYQNGNSGMNSNRNYVDLPSGGGQREGLMSYKQFIQELEDDILPTEAERRYQEYRSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNESARQLAKDFLLDLQSGTLDLNPGLSASSSRKSGQASEPNSEEEADGKQRRNGWGSNKQSDFSAAPKTHPISSEPWRIQADVQQAQALVRKLDTEKRIADNILCSSDHNKTDDKSHSGSVGPTVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNEAKGFRHVRPEKTGYEETGKSGSEWEKKLDSFWQGRLNGQDPLEVMAAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELALEQTSKLREDLYTQNYMNDPDAPGGKPVMQQPQKENRPLNRRFGLEGRLGDDRGNRRDYERNDRINGDRPNSPSRERQSKALEMGNHDETMQDTYAGPGVPTFASDMPPPVLMPVPGAGPLGPFVPAPPEVAMQMFREQGGPSSYDASGVNMSGPLHMGGPAPIIALPPGFRPDPRKMRSYQDLDAPDEEVTVIDYRSL* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1964 749 ProSitePatterns Zinc finger C2H2 type domain signature. 523 546 IPR013087 -
Mal5g1964 749 MobiDBLite consensus disorder prediction 565 629 - -
Mal5g1964 749 MobiDBLite consensus disorder prediction 303 318 - -
Mal5g1964 749 Pfam Arsenite-resistance protein 2 463 607 IPR007042 -
Mal5g1964 749 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 749 IPR039727 GO:0006397
Mal5g1964 749 MobiDBLite consensus disorder prediction 319 333 - -
Mal5g1964 749 MobiDBLite consensus disorder prediction 19 52 - -
Mal5g1964 749 MobiDBLite consensus disorder prediction 144 183 - -
Mal5g1964 749 MobiDBLite consensus disorder prediction 1 201 - -
Mal5g1964 749 MobiDBLite consensus disorder prediction 54 114 - -
Mal5g1964 749 MobiDBLite consensus disorder prediction 589 629 - -
Mal5g1964 749 MobiDBLite consensus disorder prediction 711 735 - -
Mal5g1964 749 Pfam SERRATE/Ars2, N-terminal domain 221 302 IPR021933 -
Mal5g1964 749 MobiDBLite consensus disorder prediction 303 358 - -
Mal5g1964 749 MobiDBLite consensus disorder prediction 334 349 - -
Mal5g1964 749 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1964 Mal-Chr5 42715662 42722613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1964 69 749 C2H2 Transcription Factor Family AT2G27100 61.693 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1964 - - gmx:100811300 953.355