Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1960 ATGGGGATCCAAACAATGGGGTCTCAAGGCGGTGGAGATGGTAGTGGAAAACAGTCGCAACTCCACTCTCTAATGCGGCAAAATTCTGTGTACAGTCTCACATTTGATGAGGTTCAAAATCAGTTAGGTGACTTAGGGAAGCCACTAAGTAGTATGAACCTAGATGAGCTTCTGAAAAATGTATTGACTGTTGAGGTGAACCAGTCAACGAGTACAGACAATGAAGGCACAACACAAGCTAGTGAAGCTTCTCTTCAACGTCAAGCTAGTCTGGCGTTAAAAGCTGCATTCAGCAAGAAGACTGTGGATGAGGTTTGGAGAGATATCCAACAAAAGAAAGACAACGAGGAGAAGAAATCACGAGAGAGACAACCTACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATTGTTGCAGAAGCATCTTCCAATAAAATGAATACCGATACTACAGCTGCAGTCGATTCAAATGCAGCAGTATCACAGTTTCCTCCACAGGGTCAGTGGATACAGTATCCGCAACCACAATATCAGCATCTACAACAAAATTCAATGGGGATTTATATGCCTAGCCAGGGTATAGCACAACCGTTACACATGGTGGCTGGTGCTTCGATTGAGATTCCATTTTCAGATAGTCATATGGCATTGGGTGCACCTCTTATGGGAACTGTGTCGGATACGCAGATGCTCGGAAGAAAAAGGAGCACTCCAGAGGATATGGTGGAGAAGACTGTTGCGAGAAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACAAATGAATTGGAGATTAAAGTTTCACGCCTGGAAGAGGAAAACGAAATGCTGAGGAAACGAAAGGAGCTAGAGAATATGTTGCCATGTGCACCAATTTCTGAACCTAAATATCAACTACGCCGAATAGCATCTTCTCCCTTCTGA 969 0.4407 MGIQTMGSQGGGDGSGKQSQLHSLMRQNSVYSLTFDEVQNQLGDLGKPLSSMNLDELLKNVLTVEVNQSTSTDNEGTTQASEASLQRQASLALKAAFSKKTVDEVWRDIQQKKDNEEKKSRERQPTLGEMTLEDFLVKAGIVAEASSNKMNTDTTAAVDSNAAVSQFPPQGQWIQYPQPQYQHLQQNSMGIYMPSQGIAQPLHMVAGASIEIPFSDSHMALGAPLMGTVSDTQMLGRKRSTPEDMVEKTVARRQKRMIKNRESAARSRARKQAYTNELEIKVSRLEEENEMLRKRKELENMLPCAPISEPKYQLRRIASSPF* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1960 322 CDD bZIP_plant_BZIP46 252 306 - -
Mal5g1960 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 320 IPR043452 GO:0003700|GO:0045893
Mal5g1960 322 SMART brlzneu 248 320 IPR004827 GO:0003700|GO:0006355
Mal5g1960 322 MobiDBLite consensus disorder prediction 1 20 - -
Mal5g1960 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 255 270 IPR004827 GO:0003700|GO:0006355
Mal5g1960 322 Pfam bZIP transcription factor 251 296 IPR004827 GO:0003700|GO:0006355
Mal5g1960 322 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 18 320 - -
Mal5g1960 322 Coils Coil 268 302 - -
Mal5g1960 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 295 IPR004827 GO:0003700|GO:0006355
Mal5g1960 322 Gene3D - 251 303 - -
Mal5g1960 322 SUPERFAMILY Leucine zipper domain 252 297 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1960 Mal-Chr5 42669785 42671640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1960 14 322 bZIP Transcription Factor Family AT3G56850 53.125 3.75e-91 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal5g1960 bZIP_1 9.5e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1960 K14432 - gmx:100101875 444.121