Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1940 ATGAGTTCCATCCGAGTCCTCTCCACCACAACAATCCGTGCACCAAATCATAATCTTTGTGACTCAATTGATCATACAATCGATCTAACACCATGGGATCTACAATTCCTTCCATTTGGAGTCAACCAAAAGGGACTTCTTTATCATCACCCTTTCGAATTAGACACATCAAATCAAATTGAACACCTTAAACACTCTCTTTTTTCTACCCTTGAATTTTTTCCACCCTTTACTGGTCGTCTCAGAATCATAGAACATGAAGATAACACTATCTCGTGTTCCATCAAATGCAACAACGAAGGTGCACTCTTTGTGCATGCTGTCGCAGAAAACACTAGTGTCGCTGACATACTTGCACCCACATATCTTAACCCTATTCTGCACTCATTTTTTCCTCTTAACGGAGTTAAAAATTATGAAGGGACATCTCAACCATTACTTGCCGTCCAAGTGACGGAGTTAGTTGATGGCCTCTTCATTGGTTGCACAATCAACCATGTGGTTGTTGATGGTAAGTCAATTTGGCATTTTGTCAATTCATGGGCCGAAATCTCAAAGGGTTGTCTTAAAATTTCCAAACAACCATCATTCGAACGTTGGTTTCCAAATGGTATTCAACGACCGATTCGATTTCCTTTCACAATAGAGCCACAAAATAATAACTCTAACAATGTTAATGGTAAAGAAGAAACACTAAACCCACCAGAGAGACTATTTCATTTCACAAAAGAAAATATTGCAAAACTCAAATTGAAAGCTAACTTAGAAATTGGAACAAAGAAAGTAACTTCTTTGCAAGCTCTTTTCACTCACATATGGCGCTCCATTATACGTTCGAAAAATCTTGACCCACAAGAAGAAGTTAATTATGTGGTGGTTATAGGTGTTAGACCAAGGTTGATTCCTCCTTTGCATGAGGATTATTTTGGAAATGCTATGATAGTTTGTGGTGTTACAATGAAAGCTGGTGAGTTGTTAGAAGACCGTGGTCTTGGTAAAAGTGCTTGGGAGATGAATAAGATGATTGCTTTGCATTCTGATGAGAAGTTGAAAATTGACTATCACAATTGGTTGAGAACACCAAGTTTTATTACCCCTGGGGCTGTGGCCAATAGTAATTCATTGGTAACTAGTAGTTCACCTTGGTTTGATGTTTATGGTAATGACTTTGGTTGGGGAAAACCTGTAGGAGTTCGAAGTGGGGGTGCCAATAAAAGAAATGGGAAGATTAGTGTGTTTGCTGGTGTAGAGGAAGGTAGTATGGACCTTGAAGTGTGTCTTCCTTATGAAATTTTAGAGGCAATTGGAAATGATATGGAGTTTATGGATTTTGTGTCCAGCTAA 1344 0.3862 MSSIRVLSTTTIRAPNHNLCDSIDHTIDLTPWDLQFLPFGVNQKGLLYHHPFELDTSNQIEHLKHSLFSTLEFFPPFTGRLRIIEHEDNTISCSIKCNNEGALFVHAVAENTSVADILAPTYLNPILHSFFPLNGVKNYEGTSQPLLAVQVTELVDGLFIGCTINHVVVDGKSIWHFVNSWAEISKGCLKISKQPSFERWFPNGIQRPIRFPFTIEPQNNNSNNVNGKEETLNPPERLFHFTKENIAKLKLKANLEIGTKKVTSLQALFTHIWRSIIRSKNLDPQEEVNYVVVIGVRPRLIPPLHEDYFGNAMIVCGVTMKAGELLEDRGLGKSAWEMNKMIALHSDEKLKIDYHNWLRTPSFITPGAVANSNSLVTSSSPWFDVYGNDFGWGKPVGVRSGGANKRNGKISVFAGVEEGSMDLEVCLPYEILEAIGNDMEFMDFVSS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1940 447 Pfam Transferase family 22 442 - -
Mal5g1940 447 Gene3D - 2 208 IPR023213 -
Mal5g1940 447 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 444 - -
Mal5g1940 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 444 - -
Mal5g1940 447 Gene3D - 235 441 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1940 Mal-Chr5 42189077 42190420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1940 63 430 Monolignol Biosynthesis Gene Families AT5G48930 28.232 5.46e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1940 - - gmx:100500257 556.984