Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1919 ATGCAATCTAACTTAGGAAATTTTATTAGTCCAAATGGATGGTTACCATGGGTTGGAGATTCTGCACCAGATACTATATTTTATGCTGAGTTTCAGAATTTTGGAGGTGGTGCTTCAATGAAGAATAGGGTTAAGTGGAAGGGTTTGAAAAGTATTACAAGTAAACAAGCTAATAAGTTTACTGTTAAGGCTTTTCTTCATGGAGATAAATGGATTCCTGCTTCTGGTGCAACATTTAAATCTTCTCTGTAA 252 0.3492 MQSNLGNFISPNGWLPWVGDSAPDTIFYAEFQNFGGGASMKNRVKWKGLKSITSKQANKFTVKAFLHGDKWIPASGATFKSSL* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1919 83 SUPERFAMILY Pectin lyase-like 1 79 IPR011050 -
Mal5g1919 83 Pfam Pectinesterase 1 69 IPR000070 GO:0030599|GO:0042545
Mal5g1919 83 PANTHER PECTINESTERASE 1 81 - -
Mal5g1919 83 PANTHER PECTINESTERASE 1 81 - -
Mal5g1919 83 Gene3D - 1 83 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1919 Mal-Chr5 40983784 40984035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1919 1 83 Carbohydrate Esterase AT3G10710 60.241 1.63e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1919 - - ccaj:109817308 145.206