Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal5g1904 | ATGACTGTTAAGACCATGAAGAAGGGAGAGAAAGTGATTTTGACCGTGAAGCCACAATATGGACTTGGTGAGAAAGGCAAGCCAGCTTTCGGTCGACGACATAAAGATTTAGTTCCACCTAAGGCAACCTTGTATTATGAGGTTCAGCTAGTAGAATTTGTGAAGGATAAGGGGTCCTGGGATATGAACACTAACGAGAAGATATTAGCTGCTCGTAAGAAGAGAGAAGAAGGCGAAGCATTGGTTAGAGCTAAAAAATTTGCAAGAGCTTCTAAAAAATTTGAGAAGGCTGTAAAGTTCTTAGAGTATGATACTTCCTTTAGTGATAATGAAAGAAATATGAATGTGGAGGTAACGTACAACAAGGATATTGACATAAACGGGAAGGTGAAGAAGGGTGCAAAATATTACGGGAACTGGATCCCTGTGACAACAATTTTATTGCAACTTACAGAAACTATGGAAGATCATTGCAAGACTTTATTTCAGCAATTCCATTTCTTAAACTGCAGAGGCCAACAACAAATTATGATAAACTGTTGTAAAGAATGTCTTGATCCATCCATGTCGACAACAACATATTCAGACCTTCAGAATGTGGAAGATTACATGGACAATGAATAG | 624 | 0.3814 | MTVKTMKKGEKVILTVKPQYGLGEKGKPAFGRRHKDLVPPKATLYYEVQLVEFVKDKGSWDMNTNEKILAARKKREEGEALVRAKKFARASKKFEKAVKFLEYDTSFSDNERNMNVEVTYNKDIDINGKVKKGAKYYGNWIPVTTILLQLTETMEDHCKTLFQQFHFLNCRGQQQIMINCCKECLDPSMSTTTYSDLQNVEDYMDNE* | 208 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal5g1904 | 207 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 54 | IPR001179 | GO:0003755 | |
| Mal5g1904 | 207 | Gene3D | - | 1 | 59 | IPR046357 | GO:0003755 | |
| Mal5g1904 | 207 | Gene3D | Tetratricopeptide repeat domain | 60 | 163 | IPR011990 | GO:0005515 | |
| Mal5g1904 | 207 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 52 | 114 | - | - | |
| Mal5g1904 | 207 | SUPERFAMILY | FKBP-like | 3 | 73 | - | - | |
| Mal5g1904 | 207 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 3 | 51 | IPR001179 | GO:0003755 | |
| Mal5g1904 | 207 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 52 | 114 | - | - | |
| Mal5g1904 | 207 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 2 | 52 | - | - | |
| Mal5g1904 | 207 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 2 | 52 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal5g1904 | Mal-Chr5 | 40534874 | 40537131 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal5g1904 | 1 | 56 | Calmodulin-binding Proteins | AT5G48570 | 41.379 | 7.57e-07 | 47.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal5g1904 | K09571 | - | sly:101253200 | 126.331 |