Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1902 ATGGCTGGTCGAAGTTCCTTTTACTATGATGTGTTCTTCAGCTTCAGAGGTGAAGACACAAGACTTGGTTTTACAGGAAACCTCTACAGTGCTTTGAGTCAAAGAGGGATCCATAGTTTCTTTGATGACAAAGAGATTCGAAAAGGAGATGAAAAAACTCCATCACTTGTCAAGGCAATTAAAGAATCAAAGATTGCGATCATTGTTCTTTCTAAAACATATGCTTTTTCTTCCTTTTGTTTAGATGAACTTTCCACCATTCTAGACTGCTTTGAAGAGAACAAGGGTCAGCTTGTTTTACCTGTTTTCTTCAACGTTGATCCTTCTGATGTACGACACTGCAGAGGAAGTTATGGTGAAGGTTTAGCAAAACTTGGAGAGAGGTTCAAGGGTGACAATGACAAACTCATCAAATGGAGGACTGCTCTACAAAAGGCAGCTAACATAGCCGGCTTCACTTTCAAGAATGGGAACGGATATGAATATCAATTCATTTGGAGTATCTTCAAGGAAGTCTCCCTCAAGATTAATCGTACACTTTTACATGTTGCGAATTATCCAGTTGGATTGGAGTCTCGAGTGGATGAAGTAATCTCGCGTCTGAATGTTGGCTCTGATGACACGGTCCAGATGGTAGGTATACATGGAATTGGGGGAATTGGTAAGAGTACTATTGCTCGAGCAGTATATAATTCCATTAGTAACCACTTTGAAGGTTTCTGTTGTTTTCTCGAAAACGTGAGGGAGAATTCGCGCAAATATGGCTTAGGTCATCTGCAACAGATGGTTCTTTCTGATATACTTGGAGACGAGGATTTTAAGTTGAGAAATGTTAGCAATGGGATGCCAATGATTGAGCATAGGCTCTGCAGTAAAAAGGTTCTTTTGGTTCTTGATGATGTTGACAAAATAGAGCAGTTGCAGGCTATTGCTGGAGCACCTAATTGGTTTGGTTTGGGTAGCAGAGTAATCATTACAACTCGGGGCTATGGCTTACTTAAACAACATGAGGTTAAAAGTACATATGAGGTGGAGGAGTTGAATGACAAAGAAGCCCGTGAATTACTTTGTTGGAATGCTTTCAAAACTGATAAAGTTGATTCAAGATACACCGCCATTTTAAACCGTGCAGTGGGTTATGCTTCTAGGCTTCCGTTGGCTTTGGAAGTTATAGGTTCCAACTTGTTCGGAAAAGGGGAAGACGAATGCACACGTACATTAGATCGGTACGACCGATTTCCAGATAAAAAGATCAAAGACTTACTTAAAGTCAGCTATGATTCCTTGGAGGAAGATGAGGGGAATGTTTTTCTTGACATTGCTTGTTTCTTCAATGGACATCAGTTGGCAGATGTCGAAGATATACTTTCGGCTCATTATAGTTTCTCTGTGAAACATAGTATTAAAGAACTGATTGAAAAATCTCTGATAAAGATTGACGGTGGTCTTATGACATTACATTACCTGATACAAGACATGGGCAGAGAAATTGTCCGACTTGAATCACCACATGAGCCTGGCAAACGTAGTAGGTTATGGTTCTATGAAGATGTAGTCCAGGTTTTAAATGAAAATAAGGCTCTAGATTTCGTAAAGGATGTTGATGACTCCGTTAGTGATGAGAAGAAGAAAATTGTTATGAGCTTGGAGGATGATTGCTTTAAGGGCATTTCGAAGTGCATGGAGTTCTATGAAGAGGACGATATTTGTAGATTACTGTTTGCCGAGAACAATCGAAAAACAGCTGAAGAAAACTACGTCAACGATCCTCTTGACGTTGATGCCCCAGAACTACACATGAAGATCCACAAAAGTGGGTTTGGGCTTGGTCAGATGAGTCATAGAGAGGCCTCTGCTTCATCAAAAGAAAAGGTTGGATTTGGCAAAAAAATTAATTGCATTTAA 1905 0.3984 MAGRSSFYYDVFFSFRGEDTRLGFTGNLYSALSQRGIHSFFDDKEIRKGDEKTPSLVKAIKESKIAIIVLSKTYAFSSFCLDELSTILDCFEENKGQLVLPVFFNVDPSDVRHCRGSYGEGLAKLGERFKGDNDKLIKWRTALQKAANIAGFTFKNGNGYEYQFIWSIFKEVSLKINRTLLHVANYPVGLESRVDEVISRLNVGSDDTVQMVGIHGIGGIGKSTIARAVYNSISNHFEGFCCFLENVRENSRKYGLGHLQQMVLSDILGDEDFKLRNVSNGMPMIEHRLCSKKVLLVLDDVDKIEQLQAIAGAPNWFGLGSRVIITTRGYGLLKQHEVKSTYEVEELNDKEARELLCWNAFKTDKVDSRYTAILNRAVGYASRLPLALEVIGSNLFGKGEDECTRTLDRYDRFPDKKIKDLLKVSYDSLEEDEGNVFLDIACFFNGHQLADVEDILSAHYSFSVKHSIKELIEKSLIKIDGGLMTLHYLIQDMGREIVRLESPHEPGKRSRLWFYEDVVQVLNENKALDFVKDVDDSVSDEKKKIVMSLEDDCFKGISKCMEFYEEDDICRLLFAENNRKTAEENYVNDPLDVDAPELHMKIHKSGFGLGQMSHREASASSKEKVGFGKKINCI* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1902 634 Gene3D - 177 342 IPR027417 -
Mal5g1902 634 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 12 541 - -
Mal5g1902 634 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 541 IPR044974 GO:0006952
Mal5g1902 634 SUPERFAMILY "Winged helix" DNA-binding domain 416 522 IPR036390 -
Mal5g1902 634 Pfam TIR domain 9 172 IPR000157 GO:0007165
Mal5g1902 634 Gene3D - 346 430 IPR042197 -
Mal5g1902 634 Gene3D - 8 176 IPR035897 -
Mal5g1902 634 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
Mal5g1902 634 Pfam NB-ARC domain 191 398 IPR002182 GO:0043531
Mal5g1902 634 PRINTS Disease resistance protein signature 288 302 - -
Mal5g1902 634 PRINTS Disease resistance protein signature 381 395 - -
Mal5g1902 634 PRINTS Disease resistance protein signature 211 226 - -
Mal5g1902 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 440 IPR027417 -
Mal5g1902 634 ProSiteProfiles TIR domain profile. 7 176 IPR000157 GO:0007165
Mal5g1902 634 SMART till_3 8 149 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1902 Mal-Chr5 40520068 40529685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1902 188 530 WRKY Transcription Factor Family AT5G45050 32.764 1.05e-42 164