Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1881 ATGAGTTCCATCCAAGTCCTCTCCACCACTACAATCCATGCACCAAATCACGAACTTTGTGACTCAAATGATCATACAATCGATCTAACACCATGGGATTTACAATTCCTCCCATTTGGAGTAAACCAAAAGGGCCTTATTTATCATCACCCTTCTAAACTAGACACATCAAATCATATCGAACATCTTAAACACTCTCTTTCCTCCACTCTTGAATTTTTTCCACCCTTTACAGGTCGTCTCAAAATCAAGGAACATGAAGATAATACTATCTCGTGCTCCATCACATGCAACAATGAAGGTGCACTCTTTGTCCACGCTGCAGCAGAAAACACTAGTGTTGACGACATCCTTGCAGCCACTTATCATCCTAAAATTCTCCACTCATTCTTTCCATTTAACGGAGTGAAAAACTACGAAGGTACATCAAACCCATTACTTGTAGTCCAAGTAACAGAGCTAGTAAATGGCATCTTCATTGCTTGCACAATTAATCATGTGGTCGCTGATGGTACCTCAATTTGGCAATTCATCAATTCATGGGCCAAAATCTCAAAGGGTTGTCTTGAAATACCCAAAATCCCATCATTTAAACGTTGGTTTCCAAATTGTATTCAACTTCCAATTCGATTTTCTTTCACAACAGAACCGCAAAATAATTATTCAAATAATGATCATGATAAAGAAGAAAAACTCAACCCACCAGAGAGGTTATTTCATTTCACAAAAGAGAATATTGTAAAACAAAAATTGAAAGCCAACTTAGAGGCCGGTACAAAGAACATATCTTCTTTGCAAGCACTTTTCACTCACATTTGGCGATCTATTATACGTTGCAAAAATCTTGACCCACAAGAGGAAGTGCATTATGCGGTTGTTATAGGTGTTAGACCAAGGTTGATTCCTCCGTTGAAAGAGAATTATTTTGGGAACGCTATGATAGATTGTGTTGTTACCATGAAAGTTGGTGACTTGTTGCAAGACGGTGGACTTGGTAAAGGTGCTTGGGAGATGAACAAGATGATTGCTTCGCAAGCAAATGAGAAGTTGAAAAATGACTATGAGATTTGGTTGAAAACACCGAGTTTTATTAATGTCGGTATGTACAATAGTAAAACATTAATTTCTGGTAGTTCACCTTGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGGAAACCTGTGGGGGTTCGAACCGGGGGTGAAAATAAAGAAAGTGGAAATATTTGTGTGTTTGCGGGTTTAGAAGAAGGTAGTATGGATCTTGAAGTGTGCCTTCCCTATGAAACTTTGGAGGCAATTGGTAATGATCCTGAGTTTATGGATGTTGTGTCCAACTAA 1341 0.384 MSSIQVLSTTTIHAPNHELCDSNDHTIDLTPWDLQFLPFGVNQKGLIYHHPSKLDTSNHIEHLKHSLSSTLEFFPPFTGRLKIKEHEDNTISCSITCNNEGALFVHAAAENTSVDDILAATYHPKILHSFFPFNGVKNYEGTSNPLLVVQVTELVNGIFIACTINHVVADGTSIWQFINSWAKISKGCLEIPKIPSFKRWFPNCIQLPIRFSFTTEPQNNYSNNDHDKEEKLNPPERLFHFTKENIVKQKLKANLEAGTKNISSLQALFTHIWRSIIRCKNLDPQEEVHYAVVIGVRPRLIPPLKENYFGNAMIDCVVTMKVGDLLQDGGLGKGAWEMNKMIASQANEKLKNDYEIWLKTPSFINVGMYNSKTLISGSSPWFDVYGNDFGWGKPVGVRTGGENKESGNICVFAGLEEGSMDLEVCLPYETLEAIGNDPEFMDVVSN* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1881 446 Coils Coil 248 268 - -
Mal5g1881 446 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 444 - -
Mal5g1881 446 Gene3D - 2 208 IPR023213 -
Mal5g1881 446 Pfam Transferase family 22 441 - -
Mal5g1881 446 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 444 - -
Mal5g1881 446 Gene3D - 235 436 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1881 Mal-Chr5 39646454 39647794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1881 48 432 Monolignol Biosynthesis Gene Families AT5G48930 26.914 2.70e-29 117