Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1855 ATGGTTTTTGATAGCTATGATGATGCTTGGAAGTTTTGGGCTGATTATGGAGGGAGAGTTGGATTTGGAGTGAGAAAACAATATGTTCACAAGAACAAAGATAACTTAGCTACTTCTTGCAGATTTGTTTGTTGCAAAGAAGGCGTACGAAAACCAGACAAACGTGATTATAAAACAATCAAGCCAAGAGCAGAGACCAGAACTAACTGTCAAGCAAGGATAGGACTTAAGAATATCGGTGGAGTTTGGATGGTGCGCGATTTTAATCCAGAACATAACCATATTATGCACATGCCAGAAACAACTCATATGTTGTCATCTCAACGAAAACTTTCAGAAATTCAATGTCAACAAATTGATCTAGCAGATGATGCTGGTCTCCAACAAAGGAATTCATTTGATTTGATGAGTAAGGAAGTGGGAGGTAGAACCAACTTGGGATTTATACGCCTTGATCAAAAGAATTATCTCCGGAAAAAAAGGGAAAGAAGTTTGGTATACGGGGAAGCCGGCTATTTGTTACAATACTTTCAGAAAATGTCAATTGTAAATCCCTCTTTCTATCATGCCTATCAAATGGATGTGGAAGATCAAATTACTAATGTGTTCTGGGCAGATGCAAGGATGCTCATTGATTATGGGTATTTTGGTGATGTGGTTTCTCTTGATTCAACATATTGTACAAATACTTTATATAGACCACTTGCAGTGTTTTCAGGATTTAACCACCATCGTAAAACAGTGATTTTTGGGGCTGCATTATTGTATGATGAAACAACAGAGTCATATAAGTGGCTGTTTGAAACATTTTTAGAGGCACGCAAGCTGAAAATGCCTAAAACTGTTTTTACTGATCAAGCTCAAGCAATGGCAAACGCACTTGTTGAGGTTATGCCTGAAGCTTACCATGGCCTATGTACGTGGCATTTGATGCAAAATGGCATCAAACACTTAGGAAATTTAATGAAAGGCGAATCTCATTTTCTCAGTGACTTTAAGAAGTGTATGTATGGCTATGATGATGAAGAACAATTTGAAGAAGGTTGGACAAACCTCCTTGTAAACTACAAGGACTACAAGGTTGAGGAAAATACTTGGTTGAGAAGAGTCTACACTATGAAGGAGAAATGGGCATCATGTTACACGAAGAAGGCTTTTACATTAGGAATGCGAAGCACCCAACTCAGTGAAAGTGTGAACGCAAATATTAAACGTTTTATGAAGGAGATCTGTCCTCATTTCATTAGGATTGCCACTGAAGGATGTAGAAGTCCAGAAACATTTGCTTTTCTTACCAAAGTTGTTGATGAATTGGATAGGCTGGTACTAGAGTTTCAAAACTGTCAAGTAAGTAGTGATCAAGAGGATATGTTTCTTAGCAAAATTAAAGAGATTGAAAGTAGCATCGATGGTTCAACACAAGCCAAGGGCTTTAAAAAAAGAGAAGGAAGAAAAGGTGTAAAACGTTACAAAAGTTTCTTAGAGCGTAAACTTGCCAATAGAAAGAAAAATGAAGGTTCAAGTGCTTCACAAACAAAGAACAATGCTAGAAGGGTAACAATTGCCAAAAAAAGCAAAAATGGAGACTTAAGTGATTCACAAAAGCAAATGCAATATGAGGTGCCCAATACAAGTGGAACTATTTCGCTCAATGATGTATCCATGAAAGAGAACAGCACTAATTTCACTAGCTTAATGAGGACAAACCTTCATGAGGATACCACAACATTGATGAATCCATAA 1743 0.3729 MVFDSYDDAWKFWADYGGRVGFGVRKQYVHKNKDNLATSCRFVCCKEGVRKPDKRDYKTIKPRAETRTNCQARIGLKNIGGVWMVRDFNPEHNHIMHMPETTHMLSSQRKLSEIQCQQIDLADDAGLQQRNSFDLMSKEVGGRTNLGFIRLDQKNYLRKKRERSLVYGEAGYLLQYFQKMSIVNPSFYHAYQMDVEDQITNVFWADARMLIDYGYFGDVVSLDSTYCTNTLYRPLAVFSGFNHHRKTVIFGAALLYDETTESYKWLFETFLEARKLKMPKTVFTDQAQAMANALVEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESHFLSDFKKCMYGYDDEEQFEEGWTNLLVNYKDYKVEENTWLRRVYTMKEKWASCYTKKAFTLGMRSTQLSESVNANIKRFMKEICPHFIRIATEGCRSPETFAFLTKVVDELDRLVLEFQNCQVSSDQEDMFLSKIKEIESSIDGSTQAKGFKKREGRKGVKRYKSFLERKLANRKKNEGSSASQTKNNARRVTIAKKSKNGDLSDSQKQMQYEVPNTSGTISLNDVSMKENSTNFTSLMRTNLHEDTTTLMNP* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1855 580 MobiDBLite consensus disorder prediction 531 551 - -
Mal5g1855 580 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 407 IPR031052 GO:0006355
Mal5g1855 580 MobiDBLite consensus disorder prediction 523 551 - -
Mal5g1855 580 Pfam MULE transposase domain 219 313 IPR018289 -
Mal5g1855 580 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
Mal5g1855 580 PANTHER OS03G0181600 PROTEIN 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1855 Mal-Chr5 38497091 38499510 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g1855 MULE 2.1e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1855 - - ccaj:109815076 564.303