Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1834 ATGGCTTCTTCGAAGACTGTCCAGGATGTTTCACCTCACGAATTCGTTAAGGCTTACTCCGCTCACCTCAAGCGATCTGGCAAGATGGAGCTTCCTGAGTGGACTGATATTGTCAAAACTGCAAGATTCAAAGAATTGGCTCCCTACGATCCGGATTGGTATTATGTTAGAGCTGCTTCCATTGCAAGGAAGATCTACTTGAGAGGTGGTCTTGGCGTTGGTTCATTTCAGAGGATTTATGGTGGGAGCCAGAGGAATGGAAGTCGCCCTCCCCATTTTTGCAAGAGCAGTGGCTCTATTGCTCGTCACATTCTTCAGCAGTTGCAGAACATGAACCTCATCGAGATGGATACCAAGGGTGGCAGGAAAATTACATCCAGTGGCCGGCGGGATCTTGACCAAGTGGCTGGAAGGATTCTAGTTGCACCTTGA 432 0.4838 MASSKTVQDVSPHEFVKAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASIARKIYLRGGLGVGSFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNLIEMDTKGGRKITSSGRRDLDQVAGRILVAP* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1834 143 PANTHER 40S RIBOSOMAL PROTEIN S19 3 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mal5g1834 143 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Mal5g1834 143 Pfam Ribosomal protein S19e 6 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mal5g1834 143 PANTHER 40S RIBOSOMAL PROTEIN S19-3 3 142 - -
Mal5g1834 143 Gene3D - 1 142 IPR036388 -
Mal5g1834 143 SUPERFAMILY "Winged helix" DNA-binding domain 6 141 IPR036390 -
Mal5g1834 143 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1834 Mal-Chr5 37887867 37890870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1834 1 142 Cytoplasmic Ribosomal Protein Gene Family AT5G61170 82.394 3.58e-91 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1834 K02966 - gmx:100499800 276.944