Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1824 ATGGAAGGAATTACCAACGGCCACGTTGAAGCAACCTTTTGTTTGAGCAAAAATGGTGGTGATCCACTCAACTGGAGTGCAACGGCAGAGTTGTTAATGGGGAGTCATTTCGACGAGGTAAAGCGTATGGTGAAAGAGTATCGTAACCCGGTGGTTAAAATCGGCGGCAAGACCCTAACCATTGCTCAAGTGGCTGGAATTGCCTCACATGATAGTGGTGTTAGGGTTGAGCTATCGGAGTCGGCGAGGGCCGGGGTTAAGGCGAGTAGTGATTGGGTGATGGATAGCATGAACAATGGGACCGATAGTTACGGTGTTACCACCGGTTTCGGTGCTACCTCTCATCGGAGAACCAAGCAGGGTGAATCCAATTGTACACTACCACACACAGCCACAAGAGCTGCAATGTTAGTGAGAATCAACACTCTTCTTCAAGGGTACTCTGGCATTAGATTTGAAATCTTGGAAGCAATCACAAAGCTCTTAAACAACAACATTACCCCATGTTTACCACTTCGTGGTACAATCACAGTTTCTGGTGATCTTGTTCCACTTTCTTACATTGCCGGTTTCTTAACCGGTAGACCCAACTCCAAAGCTGTTGGACCCTCTGGAGAAATTCTCAATGCCAAAGAAGCTTTTCAACTCGCAAACATCACCCTGGTCAAATTGAAGCTGCTGCTATTATGGAACATATTTTGGATGGAAGCGCTTACGTTAAAGCAGCTAAGAAGTTACATGAGACAGATCCTTTGCAAAAGCCTAAACAAGATCGATCGTTATGCACTTAGAACCTCACCTCAATGGCTTGGACCTTTGATTGAAGTGATAAGATTTTCAACCAAGTCAATTGAAAGAGAGATTAACTCGGTTAACGACAACCCTTTGATTGATGTGGCACGGAACAAGGCCATACACGGTGGTAACTTTCAAGGAACACCTATCGGAGTTTCAATGGATAACACACGTTTAGCTCTTGCTTCAATTGGTAAACTAATGTTTGCTCAATTCTCAGAGCTCGTTAATGATTTTTACAACAATGGATTGCCTTCGAATCTCACTGCTAGTAGAAATCCAAGCGCTGAGCAACACAACCAAGATGTTAACTCTTTGGGTTTAATTTCTTCTAGAAAAACAAACGAGGCTATTGAGATCTTAAAGCTTATGTCTTCTACTTTCTTGATTGCGCTTTGTCAAGCAATTGACTTAAGGCATTTGGAGGAGAATCTGAGGAACACCGTTAAGAACACTGTAAGCCAAGTTGCTAAGAGAACACTCACAACCGGTGTTAATGGAGAACTTCATCCTTCTAGATTTTGTGAGAAAGATTTGCTCAAAGTTGTTGATAGAGAATATGTATTTGCCTATGCTGATGAACCTTGTCTAGCTACATACCCATTGATGCAAAAGTTGAGACAAGTGCTTGTAGATCATGCATTGGTAAATGCAGACGGGGAGGCGACTTTGAACACATCAATTTTTCAAAAGATTGCAACTTTTGAGGAAGCATTGAAGACTATCTTGCCAAAGGAGGTTGAAAATACAAAAGCTGCATATGAAAATGGACAATGTGGAATTTCAAACAAGATTAAAGAATGCAGGTCTTATCCATTGTACAAGTTTGTTAGAGAGGAGTTGGGGACGGCGTTGTTAACGGGTGAAAAAGTTATATCACCCGGTGAAGAGTGTGACAAACTATTCACAGCTATGTGCCAAGGTAAAATTGTTGATCCTCTCTTGGAATGTCTTGGAGAGTGGAATGGTGCTCCTCTTCCAATTTGTTAA 1785 0.4213 MEGITNGHVEATFCLSKNGGDPLNWSATAELLMGSHFDEVKRMVKEYRNPVVKIGGKTLTIAQVAGIASHDSGVRVELSESARAGVKASSDWVMDSMNNGTDSYGVTTGFGATSHRRTKQGESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITVSGDLVPLSYIAGFLTGRPNSKAVGPSGEILNAKEAFQLANITLVKLKLLLLWNIFWMEALTLKQLRSYMRQILCKSLNKIDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVARNKAIHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLRNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYADEPCLATYPLMQKLRQVLVDHALVNADGEATLNTSIFQKIATFEEALKTILPKEVENTKAAYENGQCGISNKIKECRSYPLYKFVREELGTALLTGEKVISPGEECDKLFTAMCQGKIVDPLLECLGEWNGAPLPIC* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1824 594 Pfam Aromatic amino acid lyase 59 225 IPR001106 -
Mal5g1824 594 Pfam Aromatic amino acid lyase 259 356 IPR001106 -
Mal5g1824 594 Pfam Aromatic amino acid lyase 358 415 IPR001106 -
Mal5g1824 594 SUPERFAMILY L-aspartase-like 21 594 IPR008948 GO:0003824
Mal5g1824 594 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 256 360 - -
Mal5g1824 594 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 18 220 - -
Mal5g1824 594 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 360 594 - -
Mal5g1824 594 Gene3D - 13 226 IPR024083 -
Mal5g1824 594 CDD PAL-HAL 57 404 IPR001106 -
Mal5g1824 594 Gene3D Fumarase/aspartase (Central domain) 527 594 - -
Mal5g1824 594 PANTHER HISTIDINE AMMONIA-LYASE 256 360 IPR001106 -
Mal5g1824 594 PANTHER HISTIDINE AMMONIA-LYASE 18 220 IPR001106 -
Mal5g1824 594 PANTHER HISTIDINE AMMONIA-LYASE 360 594 IPR001106 -
Mal5g1824 594 Gene3D - 407 526 IPR023144 -
Mal5g1824 594 Gene3D Fumarase/aspartase (Central domain) 240 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1824 Mal-Chr5 37527678 37529878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1824 7 594 Monolignol Biosynthesis Gene Families AT2G37040 62.045 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1824 K10775 - gmx:100302735 603.208