Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1816 ATGGAACTTCCTCAGTTTGTTGTCAAGGCTGGTCCAATTTTAAGCAATCTATATGGGTCGGATTGGGAAAACAAGCTTGAGGCAAAGGAGATGCAGGCTAACACTATTCACTTGAAGATTCTTAGCAAGTATTATAAGCGTGTATTTGAAGAGTTCTTCGTGTCAACTGATGCAAATGTTGAAAATAAGTCATCTGTTACCGACCGTGTATATGAGTACCATCGTTTTGGATGGTTACTTTTCTTGGCGCTTCGTGTACATGCTTTCAGCCGTTTTAAAGACTTGGTGACTTGCACCAATGGTTTAATTTCTATCATGGCTATCCTAATTATTCATGTTCCGGCTCGTTTTCGGAATTTCAACATTCACGTCTCTTCGCGCTTCGGCCACCATTTAGTTCAAAATCCTGGATCTCCTAGAATATCACCTTTCCCAAGCCTTCCTGATATGTCCCCTAAAAAAGTGTCTGCCACACAAAATGTCAACCGCAAAGTAAGAGGACCCCTCAAATTTGATGATGTCAACGTGGGCTTGGTTAGCGACTCTATGGTTGCAAACAGCCTCTATCTGCAGAATGGAAGTTCAGCGTCATCATCGGGTGCACCTTGA 609 0.4253 MELPQFVVKAGPILSNLYGSDWENKLEAKEMQANTIHLKILSKYYKRVFEEFFVSTDANVENKSSVTDRVYEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISIMAILIIHVPARFRNFNIHVSSRFGHHLVQNPGSPRISPFPSLPDMSPKKVSATQNVNRKVRGPLKFDDVNVGLVSDSMVANSLYLQNGSSASSSGAP* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1816 202 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 135 162 IPR028309 GO:0006357|GO:0051726
Mal5g1816 202 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 2 129 IPR028309 GO:0006357|GO:0051726
Mal5g1816 202 PANTHER BNACNNG22930D PROTEIN 135 162 - -
Mal5g1816 202 PANTHER BNACNNG22930D PROTEIN 2 129 - -
Mal5g1816 202 SMART DUF3452_2 1 112 IPR024599 -
Mal5g1816 202 Pfam Domain of unknown function (DUF3452) 13 112 IPR024599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1816 Mal-Chr5 37312963 37315195 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1816 134 201 Core Cell Cycle Gene Families AT3G12280 36.885 8.34e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1816 K04681 - gmx:100779266 223.787