Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1805 ATGACTTGCGTTGAAAATACAATAGGTGAAATTTCTGAGCCACTGCTAGTTGAGAAAGTTGAAAATGAAACAAAAGAAACAGGACTTGGCCATGCTACTTTTATCAGCAAGTTGATTTTCTCTTGGGTTAATTCTTTACTCAGTTTAGGTTACTCAAAACCACTAGCCCTTGAAGACATTCCTTCACTTGTTTCTGAAGATGAAGCAAACATGGCCCATAAAAAATTTGTGCAAACATGGGAATCCCTTGTAAGAGAGAGGGCTAAGAACAATACAAAAAGCTTGGTTCTTTGGTCTATAGTTAGAACTTACTTAGAAGAAAACATATTAATAGCATTTTACGCGTTAATCAGAACTATTGTTGTTGCAGTTTCACCTCTAATACTCTATGCTTTTGTTAACTACTCAAATAGAATTGAGGGGGATCTCAAACAAGGTCTTACCATAGTTGGTTTTCTGATTCTCACCAAATTGGTTGAGTCTTTGTCTCAAAGACATTGGTTTTTTAACTCAAGGAGGTCAGGTATGAAAATGAGATCAGCTCTGATGGTGGCAGTTTATCAAAAGCAGCTAAAGCTTTCTAGCTCGGCAAGGACGAGACACTCAGCCGGAGAAATTGTGAATTACATTGCAGTTGATGCTTATAGAATGGGAGAATTTCCATGGTGGTTTCATACAGCATGGACTTCTGTATTGCAACTTGTTCTTTCCATTTGTGTCCTTTTTGGTGTTGTAGGTATTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTTATATGTGGATTTCTCAATGTACCGTTGGCAAGGATCCTACAAAATTGTCGGTCACAGTTTATGATTGCACAGGATGAACGTCTTAGATCGACTTCGGAGATTCTAAATAGCATGAAGATCATTAAGTTACAATCATGGGAAGAAAAATTCAAGAACTTAGTCGAGTCGCTACGCGATAAAGAGTTCGTATGGTTGTCTAAGGTACAGATCCTGAAATCGTCTAGTTCATTTCTGTTTTGGATGTCTCCTACAGTTATATCTGCTGTTGTTTTCCTTGGATGCGCTGTTTCCAAGAGCGCGCCATTGAATGCTGAAACCATTTTCACAATTCTTGCAACATTGAGCAACATGGGAGAACCTGTTATAATGATCCCTGAGGCTCTATCCATTATGATTCAAGTTAAGGTTTCAGCCGATCGTCTTAATAGCTTTTTGCTTGATGAAGAACTAAACAATGATGATAGTGAAAGAAACTTAAAGCAATGTTCGGTTAATGCTGTGGAAATTCAAGATGGAAACTTCATTTGGGACCATGAATCTGCGTCTCCAACTTTAACAAATGTGAATTTAGAAATCAAATGGAGACAAAAAATTGCAGTTTGTGGAGCAGTGGGATCCGGAAAATCATCTCTTTTGTATGCAATACTTGGAGAGATTCCCAAGATTCAAGGAACTGTTAATGCAGGTGGCACCCTTGCCTATGTCTCTCAAAGTTCTTGGATACAAAGTGGAACAGTTCAAGATAATATACTCTTTGGCAAGGCAATGGACAAAACAAGATATGAGAAAGCAATAAAAGCTTGTGCTTTAGATAAGGATATCAATGATTTTAGCCATGGTGATCTTACAGAAATAGGCCAAAGAGGGATTAACATGAGTGGAGGACAAAAACAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATGCTGATATCTATCTCCTTGATGATCCTTTCAGTGCAGTTGATGCTCATACTGCTGCAATACTATTCAATGATTGTGTCATGACTTCTTTAAGAGAGAAAACAGTCATTCTAGTTACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATACTATATTGTTAATGGAGGGTGGAAAAGTTATTCAATCAGGTACTTATGAGAATCTTCTGACAGCTGGAACAGCCTTTGAACTACTTGTGAGTGCTCATAAAGACACAATTACGGAGTTGAATCAAGATAATGAAAATCAATCAGGAGGTTCTCAAAATGAGGTTTTGGCTAATCCTCAAGACTCTCATGGTTTTTATCTCACTAAAAATCAAAGTGAGAGTGAGATTTCTAGTATGAAGGGTCCAATTGGTGCACAACTTACACAAGAGGAAGAAAAAGTGATTGGTAATGTTGGATGGAAGCCATTCTGGGATTATATTGTTTATTCCAAAGGGACATTCATGATGTGTTTCATCATGTTAGCACAATCTGCTTTTATGGCTTTTCAAACTGCATCAACCTTATGGCTTGCTATAGCCATTGAAATTCCAAAAGTAACTAATACCACCTTGATTGGAGTTTACTCGTTAATTTCTTTTGTTAGCGTTGTGTTTGTACATATAAGGACTTACTTAACTGCACTTCTTGGATTAAAAGCTTCCACTGCTTTCTTTTCAAGCTTCACTACAGCTATCTTCAACGCTCCGATGCTTTTCTTTGATTCCACTCCTGTAGGAAGGATTTTAACTAGAGCTTCATCAGATTTTAGTATATTGGACTTTGATATACCTTATTCCATCACCTTTGTAGCATCTGTAGTAATTGAAATTTTGGTGATAATTTGTATAATGGTTTCCGCCACATGGCAAGTTCTTATTGTTGCTGTTCCTGCAATGGCTGCGTCGGTATTTATTCAGCATTATTATCAAGCTTCTTCAAGAGAACTAATACGGATCAACGGAACCACCAAAGCTCCTGTCATGAATTTTGCAGCTGAGACATCACTTGGAGTGGTTACTGTAAGAGCATTCGACATGGCCGACAGATTTTTCGAAAACTACTTAAAACTTGTGGACACAGATGCTTCATTATTCTTTCATTCTAATGTGGCAATGGAATGGGTAGTTTTAAGGGTTGAAGCCCTTCAAAATTTGACTGTAATCACTGCAGCTTTGTTGATTATTCTACTTCCTCAGGGATATGTATCCCCAGGCCTTGTTGGATTGTCTCTTTCTTATGCTTTTACCTTAACAGGAGCCCAAATATTTTGGACTAGATGGTTTTCCAACTTATCAAACTATATTATTTCTGTTGAAAGAATCAAGCAATTCATTAACATACCAGCTGAGCCTCCTGCCATTGTGGATAATAACCGACCTCCATCTTCATGGCCTTCCAAGGGCAAGATTGATCTTCAAGGCTTAGAGATAAGATACCGTCCTAATTTGCCATTAGTCCTTAAGGGAATCACTTGTACGTTTAAAGAAGGGAGTAGGGTCGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTGATTAGTGCTTTGTTTCGCTTAGTTGAGCCTTCTAGAGGCAATATTCTTATTGATGGGATAAACATTTGCTCAATGGGATTGAAGGATTTGAGAATGAAGCTAAGCATAATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACAAACCTGGACCCACTAGGCTTGTACACAGATGATGAAATATGGAAGGCTGTAGAAAAATGTCAGCTTAAGGAAACAATCAGCAAGCTACCAAGTCTCTTGGACTCTTCAGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAAAGGCAATTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACAGAATTCTTGTTCTAGATGAAGCTACTGCATCCATTGATTCTGCCACAGATGCCATTCTACAAAGAGTAATTAGAAAAGAATTTGCAGAATGCACTGTTATAACTGTGGCTCACAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTATCTTATGGGAAAATGGTGGAATATGATGAACCTTCAAAGCTAATGGACAGCACCAACTCTTCATTCTCAAAGCTGGTAGCTGAGTATTGGTCCAGTTGCAGGAAGAGTTCCTTCCCAAACATTAGCAGAAGGCAACAATGA 3897 0.3849 MTCVENTIGEISEPLLVEKVENETKETGLGHATFISKLIFSWVNSLLSLGYSKPLALEDIPSLVSEDEANMAHKKFVQTWESLVRERAKNNTKSLVLWSIVRTYLEENILIAFYALIRTIVVAVSPLILYAFVNYSNRIEGDLKQGLTIVGFLILTKLVESLSQRHWFFNSRRSGMKMRSALMVAVYQKQLKLSSSARTRHSAGEIVNYIAVDAYRMGEFPWWFHTAWTSVLQLVLSICVLFGVVGIGALPGLVPLLICGFLNVPLARILQNCRSQFMIAQDERLRSTSEILNSMKIIKLQSWEEKFKNLVESLRDKEFVWLSKVQILKSSSSFLFWMSPTVISAVVFLGCAVSKSAPLNAETIFTILATLSNMGEPVIMIPEALSIMIQVKVSADRLNSFLLDEELNNDDSERNLKQCSVNAVEIQDGNFIWDHESASPTLTNVNLEIKWRQKIAVCGAVGSGKSSLLYAILGEIPKIQGTVNAGGTLAYVSQSSWIQSGTVQDNILFGKAMDKTRYEKAIKACALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTSLREKTVILVTHQVEFLSEVDTILLMEGGKVIQSGTYENLLTAGTAFELLVSAHKDTITELNQDNENQSGGSQNEVLANPQDSHGFYLTKNQSESEISSMKGPIGAQLTQEEEKVIGNVGWKPFWDYIVYSKGTFMMCFIMLAQSAFMAFQTASTLWLAIAIEIPKVTNTTLIGVYSLISFVSVVFVHIRTYLTALLGLKASTAFFSSFTTAIFNAPMLFFDSTPVGRILTRASSDFSILDFDIPYSITFVASVVIEILVIICIMVSATWQVLIVAVPAMAASVFIQHYYQASSRELIRINGTTKAPVMNFAAETSLGVVTVRAFDMADRFFENYLKLVDTDASLFFHSNVAMEWVVLRVEALQNLTVITAALLIILLPQGYVSPGLVGLSLSYAFTLTGAQIFWTRWFSNLSNYIISVERIKQFINIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEIRYRPNLPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGNILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYTDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRKEFAECTVITVAHRVPTVIDSDMVMVLSYGKMVEYDEPSKLMDSTNSSFSKLVAEYWSSCRKSSFPNISRRQQ* 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1805 1298 CDD ABC_6TM_ABCC_D1 110 398 IPR044746 GO:0140359
Mal5g1805 1298 SUPERFAMILY ABC transporter transmembrane region 716 1027 IPR036640 GO:0005524|GO:0016021
Mal5g1805 1298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1035 1275 IPR027417 -
Mal5g1805 1298 SMART AAA_5 451 624 IPR003593 -
Mal5g1805 1298 SMART AAA_5 1071 1256 IPR003593 -
Mal5g1805 1298 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 733 995 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g1805 1298 Gene3D ABC transporter type 1, transmembrane domain 79 413 IPR036640 GO:0005524|GO:0016021
Mal5g1805 1298 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1047 1279 IPR003439 GO:0005524
Mal5g1805 1298 CDD ABCC_MRP_domain1 424 624 - -
Mal5g1805 1298 CDD ABCC_MRP_domain2 1043 1263 - -
Mal5g1805 1298 Gene3D - 1028 1280 IPR027417 -
Mal5g1805 1298 Gene3D - 430 673 IPR027417 -
Mal5g1805 1298 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 109 390 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g1805 1298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 422 645 IPR027417 -
Mal5g1805 1298 Pfam ABC transporter 442 576 IPR003439 GO:0005524
Mal5g1805 1298 ProSitePatterns ABC transporters family signature. 549 563 IPR017871 GO:0005524
Mal5g1805 1298 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 424 647 IPR003439 GO:0005524
Mal5g1805 1298 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 16 1291 - -
Mal5g1805 1298 Gene3D ABC transporter type 1, transmembrane domain 698 1026 IPR036640 GO:0005524|GO:0016021
Mal5g1805 1298 Pfam ABC transporter transmembrane region 730 995 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g1805 1298 Pfam ABC transporter transmembrane region 109 371 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g1805 1298 Pfam ABC transporter 1062 1210 IPR003439 GO:0005524
Mal5g1805 1298 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 16 1291 - -
Mal5g1805 1298 SUPERFAMILY ABC transporter transmembrane region 97 404 IPR036640 GO:0005524|GO:0016021
Mal5g1805 1298 CDD ABC_6TM_ABCC_D2 727 1020 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1805 Mal-Chr5 36923599 36929977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1805 411 638 Calmodulin-binding Proteins AT2G36910 27.160 1.49e-18 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1805 - - gmx:100784827 2016.89