Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1796 ATGGGTATTTCCTCAAAATGGTGGTACATAAGCAAAAGAGTAATCTCTCTCATCTTTTATCTCAAAAAAATAGGGTTGGTTATCTATCTATCTATCTATCAGCTGCAAGGTAAAAGAGAAGGAAATCGATCGAATCGAATCGAAGAAGAAGAAGAAGAAGTGATGGAGGCGGTTTCAAGAAAATCATCATGGAAGTACGACGTTTTCCTGAGCTTTAGAGGTACCGACACTCGGTCGAATTTTACTAGTCATCTCTACGAAGCTCTGTCTGCGAAGGGAATCAGCACCTTCACTGACGAGAAGTTTCTAGAGAAAGAAATTGGAATTGAAGATGAACTTGTGAAGGCAATTGAAGATTCCAAGTTATTCATCGTTGTGTTCTCTAAGAACTACATAGAGTCTTCTTTCTGTTTGGATGAACTTGCTAAGATCATTAAATGCTATCAGAAGAACCGTCGATTGGTTCTTCCAGTTTTCTATCACATGGATCCGTCTGAACTGCGACACCAGAACAACAAGTTATTTTTGAAGAATTCTAATTCTGAGAGACTCCACGAATGGTCTAAAGCTCTGCGTCAAGTAGCTAACCTTTCCATCGGAGCTGGCTTCCACTTCAAACTTGGGGGTGATGGATCATATGAACACGAGTTAATTGACAATATCATTAACTTGGTCTCCGCCACAATTACTTACTACCCTTTACTTGTTGCTGATCAACTTGTTGGGGTCAACTATAAAGTCAAGGATGTAGAATGGTATCTTGATGCCGAGAAACGCAAAACATCCTTTGATCATTCCCACAATCTTATTGTAGGGATCACCGGGATGGGTGGAATAGGGAAAACCACACTTGCTCGTCAAATCTACAACTCCATTTCTCTCCAGTTTGAAGCCGCCTGTTTTCTTGGTGATGTCGCTGCAAAATCAAGGAACCACGGCTTAGTTCATCTCCAACACACCCTTCTTGCTCACACTCTTGGAGGAGACAACGACGCCGACCTTCTACCCGTAACTGTCACCGAAGGAGTTCAACTTCTAAAAGACCGTCTACGCTGCAAGAAGGTTCTCTTTGTTCTTGATGATGTTGACCACATCGATCAGCTGCAGGCAACTGTCGGCGATTGGTTTGGTTTTGGAAGCCTCATCCTCATTACCACTCGCCGCAAACAATTGCTTGCAAATCACGGGATCCAAAGAGAGTATGAGCTCAATGGCTTTGCCGACGACGAAGCTCTCGAACTGCTTTCTTGGAAGGCTTTCAAATCCGACCATGTTCATATCAGTTTTATCGATCCTTTATACCGCGCATTGGCCTGTGCTTCCGGCATTCCTTTGGCTTTGGAGCTCATAGGTTCAAACCTCTGTGGCAAACGTTTACAGGAATGGGATTCTACCTTAGACTCCTATCAAAAAAACCCTCATATTGATATTCAAACGATACTTAAACTGAGCTACGATGCTCTCCACGAGCAAGAGAAGCAAGTTTTCCTCGACATCGCCTGCTTCTTCAAAGACTACCAAATCACCGAGGTTGAACACATACTCGCTGCTCATCACGGTTTATGCTCAAAACCTCACATCCGTACCTTGGTTCAAAAATCTCTCATTAAGATTGACGAGCATGGTTGCGTGACACTGCACGACTTGATACACGACATGGGGATAAAAACTGTTCGGCAGGAATCACCAGACAACCCCGGAAATCGCAGCAGGTTATGGTCCACCGAGGATATAGTTCAAGTCTTGCAACAAAATACGGGAACAAGTAAGATTCAAATCATAGTTCTCGATTCCCCCAAACCCAAAGAACTCGTAAAATGGGATGGAAAAGCCTTCATGAATATGAAAGGCCTCCGAACGCTTATTATTAGAGATGACAAGTGTTTCTCACAAGGTCCACAGCATCTTCCAAACAGCTTAAGAGTGTTGGAATGGTGGGGATATCCTTCTCAGTCTTTCCCACCTGATTTTTATCCAAAGAAACTTGCTATTTTGAAGTTACCCTACAGTTGCTTTTCACTCCAGCCGTCCAAGTTTGAGAAGTTCGTTGCTATGGAAGTTTTGAATCTTGATAAGTGTGAATTCCTTACACACATACCTGATGTATCTGGTGCCCCTAATTTAGAAAAGCTCTCCTTTTTAAATTGTGAGAATTTAGTTTCACTTCATCAATCGATTGGGTACCTGAAAAAACTTAGAATCTTGAATGGCGGGGGATGTAAAAGGCTTCCAAATTTCCCACCCATCAAGTTGACCTCTCTTGAATTCCTCAACCTTTCACATTGTTCAACTCTTGTTAGTTTTCCAGAGATACTAGGAAATATGAAATATATAACACATCTTTCCTTGGAGTACACTGCCGTTAGAGAATTACCGTATTCAATTGAAAATCTTAGTGGGCTTCAAAGTCTAGAGCTGCGCGGTTGTGGAATGCTTCAGTTACCAAGTATTCTTGCTGCGTTGCCAGGACTTAAGGAGTTGAGAATTTCACAATGTGAAGGGTTGAAGTCATCTAAACAAGACAAAAAAGTGGAGAAGCTTGGCACAAAGATGTTATCAGGCTCATATGTGAAACACATTGATTTCTTTTCTTGCAATATATCAGACGAGTTCATTGAAGTAGGTCTCACTTGGTTTGTGAATGTTAAAGAGTTGGACCTTTCAATGAATAATTTCACAATTCTTCCTGCACACATCCAAGAATGTCGCTTTTTGTCGAAACTCCAATTAAATTATTGCATGCATCTTCGAGAAATAGAAGGGATTCCACCCAATTTAGAAATATTTTCTGCAATACGGTGCACATCCTTGAAGGATTTAGACCTCACAGTTCTTGCATCAAACAAAGAAGGCTGCTTTTTGAGGGAACTTATCCTGGACGAGTGTGAGAAGCTTGAAGAAATTAAAGGGATTCCACCAAGCATCATACTTTTGTCTGCAAGGAACTGCCGGTCCTTGACTGCTTCATGTAGAGAAGTTTTACTGAATCAGGAGTTGCATGAGGCCGGGAATAAGAGGTTCTGTTTGCCAGGATCACAAATGCCACAGTGGTTCAAGCATTTCAGCAAGGGACATTCAATTTCTTTTTGGTTCCGTAACAAGTTCCCCGCAATAACTATATGTCTTGTTGGACCGATGCATAAGCTTCCTATTAAACTCAGACCCGTTGTTATCATCAATGGCACTCAAATGGAGACAGAATTCCAAACCCAAAAAGTGTTCAATTTTGAGTTCCCGTTATTAGTTGATCACATACTTATTTTTGACCAAACACATGTGGAATTCAAAGAAGATTATGTAGATGAAGTACCTTCAGAAGATAAGTGGAATCATGCTGTAGTTTCTATTCATGTTGATTTTAGATGGGACCCAACAGAACCATTTGTTGTGCAAACTGGACTGCATGTAATCGAACAAATAAGCAGCATGGACGACATTCAATTCACCAATCCTTATAGCGAACAGTTTGTGAAAGGAAAGAAAATATTGGGCACGGCAATTTCCCATAGCAAACCTATGAAGCTGATTGAACAACTGGCTTTATTCGGTTTATGA 3555 0.4129 MGISSKWWYISKRVISLIFYLKKIGLVIYLSIYQLQGKREGNRSNRIEEEEEEVMEAVSRKSSWKYDVFLSFRGTDTRSNFTSHLYEALSAKGISTFTDEKFLEKEIGIEDELVKAIEDSKLFIVVFSKNYIESSFCLDELAKIIKCYQKNRRLVLPVFYHMDPSELRHQNNKLFLKNSNSERLHEWSKALRQVANLSIGAGFHFKLGGDGSYEHELIDNIINLVSATITYYPLLVADQLVGVNYKVKDVEWYLDAEKRKTSFDHSHNLIVGITGMGGIGKTTLARQIYNSISLQFEAACFLGDVAAKSRNHGLVHLQHTLLAHTLGGDNDADLLPVTVTEGVQLLKDRLRCKKVLFVLDDVDHIDQLQATVGDWFGFGSLILITTRRKQLLANHGIQREYELNGFADDEALELLSWKAFKSDHVHISFIDPLYRALACASGIPLALELIGSNLCGKRLQEWDSTLDSYQKNPHIDIQTILKLSYDALHEQEKQVFLDIACFFKDYQITEVEHILAAHHGLCSKPHIRTLVQKSLIKIDEHGCVTLHDLIHDMGIKTVRQESPDNPGNRSRLWSTEDIVQVLQQNTGTSKIQIIVLDSPKPKELVKWDGKAFMNMKGLRTLIIRDDKCFSQGPQHLPNSLRVLEWWGYPSQSFPPDFYPKKLAILKLPYSCFSLQPSKFEKFVAMEVLNLDKCEFLTHIPDVSGAPNLEKLSFLNCENLVSLHQSIGYLKKLRILNGGGCKRLPNFPPIKLTSLEFLNLSHCSTLVSFPEILGNMKYITHLSLEYTAVRELPYSIENLSGLQSLELRGCGMLQLPSILAALPGLKELRISQCEGLKSSKQDKKVEKLGTKMLSGSYVKHIDFFSCNISDEFIEVGLTWFVNVKELDLSMNNFTILPAHIQECRFLSKLQLNYCMHLREIEGIPPNLEIFSAIRCTSLKDLDLTVLASNKEGCFLRELILDECEKLEEIKGIPPSIILLSARNCRSLTASCREVLLNQELHEAGNKRFCLPGSQMPQWFKHFSKGHSISFWFRNKFPAITICLVGPMHKLPIKLRPVVIINGTQMETEFQTQKVFNFEFPLLVDHILIFDQTHVEFKEDYVDEVPSEDKWNHAVVSIHVDFRWDPTEPFVVQTGLHVIEQISSMDDIQFTNPYSEQFVKGKKILGTAISHSKPMKLIEQLALFGL* 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1796 1184 PANTHER ARCHAEAL ATPASE 76 947 - -
Mal5g1796 1184 Gene3D - 235 400 IPR027417 -
Mal5g1796 1184 Pfam TIR domain 65 225 IPR000157 GO:0007165
Mal5g1796 1184 PANTHER ARCHAEAL ATPASE 947 1115 - -
Mal5g1796 1184 PRINTS Disease resistance protein signature 270 285 - -
Mal5g1796 1184 PRINTS Disease resistance protein signature 349 363 - -
Mal5g1796 1184 PRINTS Disease resistance protein signature 749 765 - -
Mal5g1796 1184 PRINTS Disease resistance protein signature 440 454 - -
Mal5g1796 1184 SMART till_3 65 197 IPR000157 GO:0007165
Mal5g1796 1184 Gene3D Ribonuclease Inhibitor 601 749 IPR032675 -
Mal5g1796 1184 Gene3D Ribonuclease Inhibitor 750 845 IPR032675 -
Mal5g1796 1184 Gene3D Ribonuclease Inhibitor 846 999 IPR032675 -
Mal5g1796 1184 SUPERFAMILY L domain-like 546 967 - -
Mal5g1796 1184 Pfam NB-ARC domain 266 489 IPR002182 GO:0043531
Mal5g1796 1184 Gene3D - 59 234 IPR035897 -
Mal5g1796 1184 ProSiteProfiles TIR domain profile. 64 229 IPR000157 GO:0007165
Mal5g1796 1184 Gene3D - 406 484 IPR042197 -
Mal5g1796 1184 SUPERFAMILY Toll/Interleukin receptor TIR domain 62 197 IPR035897 -
Mal5g1796 1184 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 947 1115 IPR044974 GO:0006952
Mal5g1796 1184 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 76 947 IPR044974 GO:0006952
Mal5g1796 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 231 499 IPR027417 -
Mal5g1796 1184 Gene3D - 485 556 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1796 Mal-Chr5 36581076 36585135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1796 62 832 WRKY Transcription Factor Family AT4G12020 32.222 1.62e-77 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1796 - - mtr:MTR_8g039870 1262.67