Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1794 ATGCAAACCTTTAGTCGATTGGGTCGGAGATATTCCTATGATGTGTTCCTCAATTTTAGAGGAATTGATACCCGCAGCTGCTTTATTGACCAGCTGTACCGATGTCTTAAGAAGCTATTCCGCTGCTTCAAAGATAATCCGGAGCTTCAGCTAGGGGACAAGTTAACCGAAGGACTTAATGAGGGAATTGAAGGATCCAAGATTTTCGTTATTGTTATATCTGAGAATTATGCTTCTTCTTCATTCTGCTTAAACGAACTTGTTAAGATCCTTGATGAATTCGCTAAGCAGAATGGTCGACGCATCTTGACGGTTTTCTACCACACGAGTCTGTCTGATGTTCTTCATCAGACTGGTAGTTTTGGGCGAGCCTTGTCTGTTCTTGCTAAGTCTGCCACGCCTGAGAGTTTGGACATGTGGATCAAGGCTCTGACCAAAGTAGGTTCAACTGACTTTTCCAGCTGGCATATCCAAGTGCCAAATGACAAGAATGAATCTGAATACGAACGTGTCCCGGAGATTGTTCGCGAGGTCTCTAAATATGTGTTCTACCCAATTGGACTTTCTGATCGCGTGCATAAAGTGTTGTGTTATTTGAGTAATAAATTAGATGGCCGAGTTTGTCTAGTAGGAATATGTGGAAATCCTGGAATCGGCAAAACAACAATAGCTAGTAGCGTTTATTGCTACTACAATACTATTAATGCTAGCAACAACAACAACTTCGACTATTGTTGCTTTATTGACAAGTTTGAAGAGTATTTAAGTGAATACAGGTTATTGCATTTTAAACGTAAGGTGTTCATAGTTTTTGAAGATGTTGATGATCCGAGGCATTTGGAAGTCATTGTTAATAAACTAATTATTAATGATTGGTTTGGTTCCGGTAGCAAAATCGTCATCACTGCTCAGGACAAATGTTCTCTAGAACATCATGGGATTAAAAATATTTATGATGTGGAAAGATTTGGTGATGATGAGGCTTATGAATTGCTTGGGGTGAAAATTTTTAACTCTGACGAAATTCCTGCAAGGTATCTGAGGGTTTTTGGCAAAGCCAAAACTTATGCTTGTGGCAATCCATTTCATTTGGAATTAGTTGGTTCCTATTTGGGTGGAAAAAGTGTAGAAGAATGCATAGATGCATTAGATCGATTTGAATTGATTCCAAAGGAAGACACCAAAATGATACTACAAATGACCTTTGATGCTTTGAAGAAAGATCATCAGACTATGTTAATTGACATTCTTGACTTCAAAGAACGTGATTTGGCAGATGTTGAAGACATGCTTCGAAGGAAAAATGGCGCGTGCCCAAAAAGAGATATCAGGGTATTGCTCGAGACATCTCTCATAAGTATTGATGAGTATGGGTGCGTGAGGTTACATGCCTTAACACAGGACATGGTTAGAGACATCTCTCATAGAAAGCCACAGTTGTCTGAGGATCAGGAGTATGACGACGGAGAACCCAACGTGCCTGACGTAATTGAAGTATTTGATTTGCCGAAATTGGAACACCAATCATCGTATGAATGA 1539 0.3957 MQTFSRLGRRYSYDVFLNFRGIDTRSCFIDQLYRCLKKLFRCFKDNPELQLGDKLTEGLNEGIEGSKIFVIVISENYASSSFCLNELVKILDEFAKQNGRRILTVFYHTSLSDVLHQTGSFGRALSVLAKSATPESLDMWIKALTKVGSTDFSSWHIQVPNDKNESEYERVPEIVREVSKYVFYPIGLSDRVHKVLCYLSNKLDGRVCLVGICGNPGIGKTTIASSVYCYYNTINASNNNNFDYCCFIDKFEEYLSEYRLLHFKRKVFIVFEDVDDPRHLEVIVNKLIINDWFGSGSKIVITAQDKCSLEHHGIKNIYDVERFGDDEAYELLGVKIFNSDEIPARYLRVFGKAKTYACGNPFHLELVGSYLGGKSVEECIDALDRFELIPKEDTKMILQMTFDALKKDHQTMLIDILDFKERDLADVEDMLRRKNGACPKRDIRVLLETSLISIDEYGCVRLHALTQDMVRDISHRKPQLSEDQEYDDGEPNVPDVIEVFDLPKLEHQSSYE* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1794 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 416 IPR027417 -
Mal5g1794 512 PRINTS Disease resistance protein signature 209 224 - -
Mal5g1794 512 PRINTS Disease resistance protein signature 357 371 - -
Mal5g1794 512 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 148 IPR035897 -
Mal5g1794 512 Pfam TIR domain 13 167 IPR000157 GO:0007165
Mal5g1794 512 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 262 477 IPR044974 GO:0006952
Mal5g1794 512 Gene3D - 181 316 IPR027417 -
Mal5g1794 512 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 258 - -
Mal5g1794 512 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 262 477 - -
Mal5g1794 512 ProSiteProfiles TIR domain profile. 11 182 IPR000157 GO:0007165
Mal5g1794 512 Gene3D - 8 180 IPR035897 -
Mal5g1794 512 SMART till_3 12 150 IPR000157 GO:0007165
Mal5g1794 512 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 258 IPR044974 GO:0006952
Mal5g1794 512 SUPERFAMILY "Winged helix" DNA-binding domain 396 480 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1794 Mal-Chr5 36523282 36526790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1794 210 477 WRKY Transcription Factor Family AT5G45050 28.716 1.61e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1794 - - mtr:MTR_8g039800 395.586