Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1792 ATGGCGGTGTTTAGGTCTTTTCTTAGAAAACCATTGGAGAAAGCATTATCTTTTGTAGAGTCTTACCACCTTTCACGTAATGATCTGAACTACCCTGTTCTCACTTGTGGTCCTAGCATGCTTCCTACAATCAATGCGACAACAAGCATTTTTGTTGCTGAAAGGATCTCACCGAAATTCTGTACAGCAGCCACTCGTAGAGATATTGTAGTCGTCCGCTTACCTCATAAGCGCATAAGAAGAAGAAGAAGAAGAAGAAGACAATTGTGGTATATCCATTTAAAGGTTTTGGATCGTTCCGGAATAAATGATTTGAAGCTTTCAATCTTTAAAATAAAACTTCTGACTTGGGTTTTAGCCTTCAAGCCACAGTGCAAGTATACCATTCTATTTTGCCAAGATTTTGGGGTTAATCTGCTTTGTTCCCTCTTGATATGGGATTTTCTAGTTGCTCGCGGAGACATTGTACATTTACGCTCTCCTCAAGACCCTAGAAAGCGCATCGGAAAGCGTGTGGTTGGATTAGGGGGTGATAGCGTTACATATGATTCTGATCGCAAAAACGGTTATAAGCATGAAACTGTTGTGGCTCCAAAGGGTCATGTTTGGGTAGAGGGTGATAACAAATTTGATAGCAAAGATTCTAGAAGTTTCGGTCCAGTTCCTTATGGCCTTATTGAGAGTAGGCTATACTGGAAGTTGGTTTTGAAGAAAGGTCTTGGACTAAGCATACTGATTTATGCAATGGTCACTTGA 756 0.4048 MAVFRSFLRKPLEKALSFVESYHLSRNDLNYPVLTCGPSMLPTINATTSIFVAERISPKFCTAATRRDIVVVRLPHKRIRRRRRRRRQLWYIHLKVLDRSGINDLKLSIFKIKLLTWVLAFKPQCKYTILFCQDFGVNLLCSLLIWDFLVARGDIVHLRSPQDPRKRIGKRVVGLGGDSVTYDSDRKNGYKHETVVAPKGHVWVEGDNKFDSKDSRSFGPVPYGLIESRLYWKLVLKKGLGLSILIYAMVT* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1792 251 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 4 77 - -
Mal5g1792 251 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 150 240 - -
Mal5g1792 251 ProSitePatterns Signal peptidases I signature 3. 202 215 IPR019758 GO:0004252|GO:0016021
Mal5g1792 251 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 4 77 - -
Mal5g1792 251 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 150 240 - -
Mal5g1792 251 SUPERFAMILY LexA/Signal peptidase 149 234 IPR036286 -
Mal5g1792 251 CDD S26_SPase_I 152 229 IPR019533 GO:0004252|GO:0006465
Mal5g1792 251 Gene3D Umud Fragment, subunit A 108 238 - -
Mal5g1792 251 Pfam Signal peptidase, peptidase S26 150 185 IPR019533 GO:0004252|GO:0006465
Mal5g1792 251 Pfam Signal peptidase, peptidase S26 197 224 IPR019533 GO:0004252|GO:0006465
Mal5g1792 251 ProSitePatterns Signal peptidases I lysine active site. 170 182 IPR019757 GO:0008236|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1792 Mal-Chr5 36432674 36437501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1792 151 234 MADS-box Gene Family AT1G29960 48.810 4.27e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1792 K09647 - csv:101209167 117.087